PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009128406.1 | ||||||||
Common Name | WRKY64 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | WRKY | ||||||||
Protein Properties | Length: 257aa MW: 29379.4 Da PI: 4.8246 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 65.8 | 7.1e-21 | 101 | 162 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 l+Dg++WrKYGqK++k s + r YYrC++a +C++kk+ ++ ++ p+v +tY g+H ++ XP_009128406.1 101 LNDGFSWRKYGQKKIKASSHQRCYYRCAYAkdrNCNAKKREQQIQDSPSVYRTTYVGKHICD 162 58***************************99999*************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.5E-21 | 96 | 162 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 19.726 | 96 | 164 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.53E-21 | 98 | 163 | IPR003657 | WRKY domain |
SMART | SM00774 | 8.0E-31 | 101 | 163 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.2E-21 | 102 | 161 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MFHGADKAVE ALLRGQXSAN LLKTVLEHRR TSSVSIEPLF DTLLDSFSFA ISLFASSNTQ 60 PHRDSSQCKA TPGTARKSSK NNSNEEECLE QYSHDSPTPL LNDGFSWRKY GQKKIKASSH 120 QRCYYRCAYA KDRNCNAKKR EQQIQDSPSV YRTTYVGKHI CDVNVFSEPD DDIANGSKMI 180 RFDKMDQAMP DSVMPRLAPV EQQAITIEED TDQIMNLEFD INEFLVDDDQ LWEYQFPSFS 240 PGFLDDLSEF DHNPFLV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 5e-15 | 101 | 161 | 8 | 68 | OsWRKY45 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_009128406.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KF430070 | 0.0 | KF430070.1 Brassica rapa WRKY transcription factor 64 (WRKY64) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001288940.1 | 0.0 | probable WRKY transcription factor 63 | ||||
Refseq | XP_013719207.1 | 0.0 | probable WRKY transcription factor 64 isoform X1 | ||||
Swissprot | Q93WV7 | 3e-82 | WRK67_ARATH; Probable WRKY transcription factor 67 | ||||
TrEMBL | V5RF92 | 0.0 | V5RF92_BRACM; WRKY transcription factor 64 | ||||
STRING | Bo2g095820.1 | 1e-143 | (Brassica oleracea) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM5609 | 18 | 47 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66550.2 | 6e-78 | WRKY DNA-binding protein 67 |
Link Out ? help Back to Top | |
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Entrez Gene | 103853234 |
Publications ? help Back to Top | |||
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