 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_009127671.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
TCP |
| Protein Properties |
Length: 335aa MW: 38247.8 Da PI: 8.7635 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009127671.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 137.2 | 1.4e-42 | 104 | 225 | 3 | 133 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaaks 97
+k+drhski+T++g+RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL+ ++k++ik+ ++ + s ++e+ ++s++ + +++k
XP_009127671.1 104 KKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLISKSKASIKQVKESAAASG---NHEHLQVSDN------VNDETQKV 189
699************************************************************55554...2222233222......11222244 PP
TCP 98 kksqksaasalnlakesrakarararertrekmrik 133
+k +++ + ++k+sr+kar+rarert km+++
XP_009127671.1 190 SKGRTKRVDDSCKKKQSREKARERARERTMTKMKMR 225
444444444467888*******************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MFPSIDTNGY DLFDPFNLHE ATMLPSFTTH ILSPSSHHHY PFPSFPSSSD FLDESVLISQ 60
FLLQQQADVD SPRKLRRELE QEKKNEEWVD GTTSEKVSPR RTGKKRDRHS KICTAQGPRD 120
RRMRLSLQIA RKFFDLQDML GFDKASKTIE WLISKSKASI KQVKESAAAS GNHEHLQVSD 180
NVNDETQKVS KGRTKRVDDS CKKKQSREKA RERARERTMT KMKMRLSGLI DTSKTFADPN 240
QESRKTKIIG GAQERENLEQ ERSIIEKFLG LTSESSSSTI FGDSEESYTS LGSIRETVST 300
TGMVIPREHN TTSTASVDEE RNPISTFSLY DYLCY
|
| Expression --
Description ? help
Back to Top |
| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Detected in axillary mersitems which appears in the axils of leaves after flowering. During bud vegetative development, down-regulated in the outer layers of the meristem, but accumulates transiently in young leaf primordia. In buds bearing flowers, restricted to the provascular tissue underlying the bud. Accumulates in axillary buds, but disappears at the time of bud outgrowth. {ECO:0000269|PubMed:17307924}. |
| Uniprot | TISSUE SPECIFICITY: Expressed in axillary buds, and, to a lower extent, in axillary structures such as flowers and siliques. {ECO:0000269|PubMed:17307924}. |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that prevents axillary bud outgrowth. May also delay early axillary bud development. Probably involved in the auxin-induced control of apical dominance. {ECO:0000269|PubMed:17307924}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Repressed transiently after shoot apical meristem (SAM) decapitation (release from apical dominance). {ECO:0000269|PubMed:17307924}. |
