PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bathy10g00160
Organism
Bathycoccus prasinos
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus
Family bZIP
Protein Properties Length: 388aa    MW: 42042.3 Da    PI: 10.151
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bathy10g00160genomeORCAEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.81.5e-15264319156
                    XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                    ++elkr+rrkq+NRe+ArrsR+RK+ae+eeL +  +   +eN++L++ +e+l  e 
  Bathy10g00160 264 DRELKRQRRKQSNRESARRSRLRKQAETEELGNILERYATENMKLREAVEKLASER 319
                    689************************************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.6E-12258318No hitNo description
SMARTSM003384.7E-10264327IPR004827Basic-leucine zipper domain
PfamPF001701.6E-13265320IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.024266318IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.74E-8267318No hitNo description
CDDcd147022.99E-16269320No hitNo description
PROSITE patternPS000360271286IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0010629Biological Processnegative regulation of gene expression
GO:0090342Biological Processregulation of cell aging
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    Send to blast
MATKQHNPNA SLSRETAPNG MQQHRPQQQQ QQLQQPTATT TTTAMMNASN SMENSWAQAY  60
SAAMYNQQQQ KGGNVTQETP TGLAPPHFHN PHLAASLNNP AFAAHLLMAT SALQPQANGL  120
SPDMAAVAAA GMMMGAPPLY PQQNPQKPTK TLAVGNTGHP QKQGAQIKLA NIKREMNQHP  180
PLTTNNNNNN NNNNNNAITK DRKRLNNSSA SLTTTTTTTT TTTPPDATII NNNNKTSRNK  240
TAQATVVSPI ATIDTSNKTP TADDRELKRQ RRKQSNRESA RRSRLRKQAE TEELGNILER  300
YATENMKLRE AVEKLASERD IRTENESVLA KCIEDAGNKV PDLKQVEKPF VVSSLELFSS  360
NNINNNDGSD TTTNSGGGEG TNNSTDG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1280286RRSRLRK
2280287RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00039PBMTransfer from AT4G36730Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFO0822690.0FO082269.1 Bathycoccus prasinos genomic : Chromosome_10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007510764.10.0predicted protein
TrEMBLK8EJC30.0K8EJC3_9CHLO; Uncharacterized protein
STRINGXP_007510764.10.0(Bathycoccus prasinos)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP4426911
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.27e-19G-box binding factor 1