PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_013625169.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | bZIP | ||||||||
Protein Properties | Length: 190aa MW: 22058.1 Da PI: 5.8758 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.4 | 1.5e-13 | 75 | 124 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +++rr+ +NRe+ArrsR RK+ ++eL v+ L +eN++ ++l++ ++ XP_013625169.1 75 RKQRRMVSNRESARRSRMRKQRHLDELLSQVAWLRSENHQILEKLNQASD 124 79**************************************9999998776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.0E-12 | 71 | 135 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.5E-10 | 73 | 126 | No hit | No description |
PROSITE profile | PS50217 | 10.289 | 73 | 121 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.7E-11 | 75 | 132 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.06E-12 | 75 | 124 | No hit | No description |
CDD | cd14702 | 1.17E-17 | 76 | 123 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 78 | 93 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence Send to blast |
MHPNYDSSSI NNMQQQDYFH LNPYYNNLNP STNNNLNLLS YPQIQELNNL QSPASNNNST 60 TSDEATEETF VISERKQRRM VSNRESARRS RMRKQRHLDE LLSQVAWLRS ENHQILEKLN 120 QASDSNDLVL QENLSLKEEN LELQQVITSM KKLEGGSTSF RGRYCSSSLD HDLDQDFSCI 180 TNDPRTHHPS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 87 | 94 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_013625169.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC232554 | 0.0 | AC232554.1 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH013I08, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013625169.1 | 1e-137 | PREDICTED: basic leucine zipper 43-like | ||||
Refseq | XP_013740201.1 | 1e-137 | basic leucine zipper 43 | ||||
Refseq | XP_022553803.1 | 1e-137 | basic leucine zipper 43-like | ||||
TrEMBL | A0A0D3B1E2 | 1e-136 | A0A0D3B1E2_BRAOL; Uncharacterized protein | ||||
TrEMBL | A0A3P6AAH0 | 1e-136 | A0A3P6AAH0_BRAOL; Uncharacterized protein | ||||
STRING | Bo3g010750.1 | 1e-137 | (Brassica oleracea) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM10632 | 15 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15830.1 | 3e-74 | basic leucine-zipper 3 |