PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013593116.1
Organism
Brassica oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family BES1
Protein Properties Length: 305aa    MW: 33166.1 Da    PI: 9.5921
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013593116.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822211.12.9e-65111482145
          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqs 96 
                     +sgr+ptwkErEnnkrRERrRRai+akiy+GLR qGnyklpk++DnneVlkALc eAGw+vedDGttyrkgskp+ ++++ g++++   +ss+q 
  XP_013593116.1  11 SSGRTPTWKERENNKRRERRRRAITAKIYSGLRGQGNYKLPKHCDNNEVLKALCLEAGWIVEDDGTTYRKGSKPP-ASDMLGTFST---NSSIQP 101
                     89*************************************************************************.8888888765...567777 PP

          DUF822  97 slkssalaspvesysaspksssfpspssldsislasaasllpvlsvlsl 145
                     s++ssa++sp++sy+ sp sssfpsps++d ++++    llp+l++ ++
  XP_013593116.1 102 SPQSSAFPSPAPSYHGSPVSSSFPSPSRYDGNPSS--YLLLPFLHNIAS 148
                     889*****************************987..899999988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.6E-6011132IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MAAGGGGGGS SSGRTPTWKE RENNKRRERR RRAITAKIYS GLRGQGNYKL PKHCDNNEVL  60
KALCLEAGWI VEDDGTTYRK GSKPPASDML GTFSTNSSIQ PSPQSSAFPS PAPSYHGSPV  120
SSSFPSPSRY DGNPSSYLLL PFLHNIASSI PANLPPLRIS NSAPVTPPLS SPTSRGSKRK  180
LMTQQLPRHP LLFAISAPSS PTRRAGHQTP PTIPECDESE ESSFEDSGRW INFQSTAPSS  240
PTFNLVKQTS MVIDMKRSDW GMSGMNIKGS EFEFENGTVK AWEGEMIHEV AVEDLELTLG  300
VTKTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A8e-261494372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B8e-261494372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C8e-261494372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D8e-261494372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Bol.17370.0leaf
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_013593116.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013593116.10.0PREDICTED: BES1/BZR1 homolog protein 2-like
RefseqXP_013706127.10.0BES1/BZR1 homolog protein 2
SwissprotQ94A431e-165BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A0D3DI180.0A0A0D3DI18_BRAOL; Uncharacterized protein
TrEMBLA0A3P6E9V40.0A0A3P6E9V4_BRAOL; Uncharacterized protein
STRINGBo7g118160.10.0(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM115122333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36780.18e-79BES1/BZR1 homolog 2