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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_013590581.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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| Family |
TCP |
| Protein Properties |
Length: 316aa MW: 35749.2 Da PI: 8.473 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_013590581.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 134.3 | 1.1e-41 | 103 | 228 | 3 | 133 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaa.k 96
+k+drhski+T++g+RdRR+Rls ++a++fF Lqd+LGfdk+sktieWL+ q+k++i + ++ +++ e ++++ +++ ++ak+++ k
XP_013590581.1 103 KKRDRHSKICTAQGPRDRRMRLSQQIARKFFNLQDMLGFDKASKTIEWLISQSKASIRKVKES-VDASGGGEGDDEHLQDN-----EKAKEETmK 191
699************************************************************.44442223333333333.....455555549 PP
TCP 97 skksqksaasalnlakesrakarararertrekmrik 133
+++++++ +++ ++kesr+kar+rarert km+++
XP_013590581.1 192 VSRRRTKTVENSCKKKESREKARERARERTLTKMKMR 228
9999999999999999*******************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 316 aa
Download sequence Send
to blast |
MFPSLDTSGY DLFDPFNPHQ ATMLPFFTTP IQSPSSHHHY PLSSFPFSSD FLDESVLISS 60
FLLAQQDAAT HVADCPRKLC KKLEDKCVGG TTLEKVPRRR TGKKRDRHSK ICTAQGPRDR 120
RMRLSQQIAR KFFNLQDMLG FDKASKTIEW LISQSKASIR KVKESVDASG GGEGDDEHLQ 180
DNEKAKEETM KVSRRRTKTV ENSCKKKESR EKARERARER TLTKMKMRIS GLIDTSKIFS 240
DPIQESQKIE LTGGAQVEGK SPEQESSTTN VNMVEYQMDS VRTIEKFLGL NSDASSSSIF 300
GDSEESYASL SQLEEW
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Detected in axillary mersitems which appears in the axils of leaves after flowering. During bud vegetative development, down-regulated in the outer layers of the meristem, but accumulates transiently in young leaf primordia. In buds bearing flowers, restricted to the provascular tissue underlying the bud. Accumulates in axillary buds, but disappears at the time of bud outgrowth. {ECO:0000269|PubMed:17307924}. |
| Uniprot | TISSUE SPECIFICITY: Expressed in axillary buds, and, to a lower extent, in axillary structures such as flowers and siliques. {ECO:0000269|PubMed:17307924}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that prevents axillary bud outgrowth. May also delay early axillary bud development. Probably involved in the auxin-induced control of apical dominance. {ECO:0000269|PubMed:17307924}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed transiently after shoot apical meristem (SAM) decapitation (release from apical dominance). {ECO:0000269|PubMed:17307924}. |
