PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_013588301.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | bZIP | ||||||||
Protein Properties | Length: 299aa MW: 33389.9 Da PI: 7.1286 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.5 | 9.1e-11 | 189 | 232 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 kr +r NR +A+rsR RK+++i eLe+ v +L++e + L + XP_013588301.1 189 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSVLSPR 232 899********************************998777655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-13 | 185 | 249 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.588 | 187 | 239 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.09E-11 | 189 | 243 | No hit | No description |
Pfam | PF00170 | 2.5E-9 | 189 | 233 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.0E-13 | 189 | 240 | No hit | No description |
CDD | cd14703 | 2.88E-25 | 190 | 240 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 192 | 207 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence Send to blast |
MAQLPPKIPT MTTTTPHWPD FSSQKLPSIA ATAAATAGQQ NPSWMDEFLD FSTTRRGTHR 60 RSISDSIAFL ETPSSGVGSH HFDRFDDEQF MSMFNDDVHQ NHNNQHNNNV GPTRSSSNTS 120 TPSSDDDNKE PLSADHNRMD TTPIPSNVAG NDNNETDEVQ SQCKTEPQDG PSLNQDSGGS 180 SGNRIHDPKR VKRILANRQS AQRSRVRKLQ YISELERSVT SLQTEVSVLS PRVAFLDHQR 240 LLLNVDNSAI KQRIAALAQD KIFKDATKIK ITWLINNSLI NKLEQLSMCA HMTQVNKNM |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_013588301.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC189445 | 0.0 | AC189445.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB070L01, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013588301.1 | 0.0 | PREDICTED: basic leucine zipper 61-like isoform X2 | ||||
Swissprot | Q9M2K4 | 1e-142 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A0D3CUI3 | 1e-169 | A0A0D3CUI3_BRAOL; Uncharacterized protein | ||||
TrEMBL | A0A3P6G8J7 | 1e-169 | A0A3P6G8J7_BRAOL; Uncharacterized protein | ||||
STRING | Bo6g074510.1 | 1e-170 | (Brassica oleracea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 1e-111 | bZIP family protein |
Publications ? help Back to Top | |||
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