PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSBRNA2T00146114001 | ||||||||
Common Name | GSBRNA2T00146114001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | bZIP | ||||||||
Protein Properties | Length: 219aa MW: 25454.7 Da PI: 8.5453 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.8 | 2.3e-13 | 82 | 131 | 3 | 52 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 + +r+rr +NRe+ArrsR RKk++ieeL++ v++L N+ L +++ +l GSBRNA2T00146114001 82 DERRARRVVSNRESARRSRMRKKKQIEELQQQVEQLMVLNHNLSEKVINL 131 6689****************************************997665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.4E-14 | 80 | 144 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.116 | 82 | 145 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.44E-10 | 84 | 136 | No hit | No description |
Pfam | PF00170 | 7.1E-12 | 84 | 142 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.9E-11 | 84 | 140 | No hit | No description |
CDD | cd14702 | 2.62E-15 | 85 | 136 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 87 | 102 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence Send to blast |
MIRHLKPNME SSPHRSHHCF DILEGMPPQN DNFNSTFLQN PNFHVHLQSI SPDLSTRSNN 60 NRSDHLDPNG EPFCHREGLD PDERRARRVV SNRESARRSR MRKKKQIEEL QQQVEQLMVL 120 NHNLSEKVIN LLESNHQIIQ ENSHLKEKVS SFHLLMAEML IPMRNVDGSI NERDVNHLRG 180 ETSNRTNTFF GSFLIKALYI DIRVCIETRA THQKVLAN* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Bna.10918 | 0.0 | microspore-derived embryo |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GSBRNA2T00146114001 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013610743.1 | 1e-137 | PREDICTED: basic leucine zipper 43-like | ||||
Refseq | XP_013654644.2 | 1e-137 | basic leucine zipper 43-like | ||||
TrEMBL | A0A3P6DB27 | 1e-152 | A0A3P6DB27_BRAOL; Uncharacterized protein | ||||
STRING | Bo9g014350.1 | 1e-137 | (Brassica oleracea) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM6185 | 25 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60830.1 | 6e-71 | basic leucine-zipper 70 |
Publications ? help Back to Top | |||
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