PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSBRNA2T00011217001 | ||||||||
Common Name | GSBRNA2T00011217001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | bZIP | ||||||||
Protein Properties | Length: 602aa MW: 65257.6 Da PI: 6.3102 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.8 | 2.1e-12 | 167 | 228 | 1 | 62 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e++ k+ r+ +NRe+A+ sRqRKk ++eeLeekv + + ++L +++ e a+l+++ GSBRNA2T00011217001 167 EEDEKKKARLVRNRESAQLSRQRKKHYVEELEEKVRHMHSTITDLNGKISFFMAENATLRQQ 228 6788999*********************************9999999999999999888886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-15 | 167 | 231 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.3E-11 | 168 | 229 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.105 | 169 | 229 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.94E-12 | 171 | 229 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.2E-16 | 171 | 229 | No hit | No description |
CDD | cd14704 | 1.24E-21 | 172 | 223 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 602 aa Download sequence Send to blast |
MSQSITEEPP PPSSDSFSIP PFDDQFHHQT PIGELMSDLG FPIDGDFELT FDGMEDVYLP 60 AENETFLIPG NQEQFGDFTP ESEGSGDCLP KDADKSKSAT PLSSQGSGNC GSDVSEGTTV 120 VDQKVKVEAT TTSVTKRKKE EIEEDMSDES RSSKYRRSGE ESAVTGEEDE KKKARLVRNR 180 ESAQLSRQRK KHYVEELEEK VRHMHSTITD LNGKISFFMA ENATLRQQLG GSGMCPPPPM 240 GMYPPMAPMA YPWMPCPPYM MKQQGSQVPL IPIPRLKPQN PMGSETKTKK VASISVLGLV 300 FCLFLFGALA PVVNVNYGGI SGAFYGNYRS NYVTDQIYSQ QHRNRVLDTS RSSCAGSGVS 360 NISAPPGNGS EPLVASLFVP RNDKLVKIDG NLIINSILAS EKAVASRKAS ESSERKAADP 420 AVVTKDYHPA LPLPEVGKIK TKAANGEMQQ WFREGVAGPM FSSGMCTEVF QFDVSSTSGA 480 IIPASPAANV SAEHSKNATD THRRKNRRTL RGLPIPLPGS DFNFTKEHQR NSSSKEIKPA 540 SSMVVSVLVD PREGGDGDID GMIGGPKSLS RVFVVVLVDS AKYVTYSCVL PRSGAPHLVT 600 T* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Bna.14853 | 1e-151 | seed |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269|PubMed:17662035, ECO:0000269|PubMed:20876872}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GSBRNA2T00011217001 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013692497.1 | 0.0 | bZIP transcription factor 17-like | ||||
Swissprot | O22208 | 0.0 | BZP17_ARATH; bZIP transcription factor 17 | ||||
TrEMBL | A0A078IXC7 | 0.0 | A0A078IXC7_BRANA; BnaC04g52230D protein | ||||
STRING | Bo4g012880.1 | 0.0 | (Brassica oleracea) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM8881 | 27 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40950.1 | 0.0 | bZIP family protein |