PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi4g22130.3.p
Common NameBRADI_4g22130, LOC100834655
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 359aa    MW: 39905.5 Da    PI: 9.3626
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi4g22130.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.42.6e-072272601750
                       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                       A+rsR RK+++i+eLe kv++L++e  +   e+e
  Bradi4g22130.3.p 227 AQRSRVRKLQYIAELEGKVQSLQSEGIEVSAEME 260
                       89*********************99766666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.6E-6216275IPR004827Basic-leucine zipper domain
CDDcd147033.09E-15217267No hitNo description
SuperFamilySSF579592.06E-6226269No hitNo description
Gene3DG3DSA:1.20.5.1703.2E-7227269No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MMMANAKLQK QALLPPRSPF PTAASPYGDH GPIARPQGQG AATHHRFGHG HGHGHHQRTS  60
SESIIEEQPS WLDDLLEEPE TPVRRAGHRR SSSDSFALFD GSAASGAYAN SFEEMGGGGQ  120
AAPWGGLPEY YAKPSLYGRP QGRPWEQGMP NLAGYRPGPP MPLREKVGAH HGPPNMFRDH  180
DHVLDRRAPD EGGYDQKVGA ERKEGVLPKH AQPQSDADTK RAKQQYAQRS RVRKLQYIAE  240
LEGKVQSLQS EGIEVSAEME FLTQQNMMLD LENKALKQRL ESIAKEQVIK RVQQEMFERE  300
IGRLRSLYQQ QQQQQQQPQP SALARSNSRD LDSQFANLSL KHKDPNAGRD AVSGPLRT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi4g22130.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003577697.10.0uncharacterized protein At4g06598
TrEMBLI1IMI90.0I1IMI9_BRADI; Uncharacterized protein
STRINGBRADI4G22130.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33103666
Representative plantOGRP42521219
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G06598.16e-48