|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Bradi3g61024.1.p |
Common Name | BRADI_3g61024 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
|
Family |
GRAS |
Protein Properties |
Length: 582aa MW: 66356.9 Da PI: 7.7529 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Bradi3g61024.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 322.6 | 7.8e-99 | 199 | 570 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
+ lL++cAeav+s++ + a++lL+r++ ++s++g++ qRla+yf++AL+arla+++ + y+ l ++ts +e ++a++l+s ++ ++k++
Bradi3g61024.1.p 199 EMLLIRCAEAVASNNRSSASELLERIKWHSSSRGNARQRLAHYFAQALEARLAGTGRQFYQPLIGTRTS---IVELIKAHHLYSATFCFVKVA 288
579*********************************************************999888887...9******************** PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
+l N++I++av+g +++Hi+ ++i+ GlQWp L++ La+R++gpp++R+T +++p++g +e++ee g+rL ++A+++gv+++f++ ++ +
Bradi3g61024.1.p 289 FLFSNKTIYNAVAGRRKLHIVHYGINTGLQWPDLIRWLANREGGPPEVRMTSIDRPQPGfrLSEQIEEAGHRLDNYASKFGVSIKFHA-ITAE 380
**********************************************************99999*************************.6889 PP
GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
e+++ e+L+++p+E+l+Vn+ +q +l des++ + +rd+vL+++k+++P +v++ ++ +++s+ F++rf + l+ ++a++d +e+ +p
Bradi3g61024.1.p 381 PEAVRAEDLHIDPDEVLVVNSLFQFRNLIDESLDFDRvsPRDKVLNTIKKMKPSAFVHAISNGSYGSTFFMTRFPHVLHNFTAMLDVMETMIP 473
9*******************************9988777****************************************************** PP
GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
r++++r vEr++++r+++n++acega+r+e +++++W+ r ++aG++++pl+ +++ k +r+ + + +++e++ +l++gWk+r+L++
Bradi3g61024.1.p 474 RNNDKRLQVERAFFARSAMNMIACEGADRVEHPQNYKEWQTRSHRAGLRQLPLDPDIVLMLKEEVRNRYHKHLMINEHHWWLLQGWKGRALYA 566
*********************************************************************999********************* PP
GRAS 370 vSaW 373
+S W
Bradi3g61024.1.p 567 LSTW 570
**** PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 582 aa
Download sequence Send
to blast |
MLMEDGIVDK FVYQYPDQPK LLQAEQHFVQ ILSTAATASF DAQESSAPDA LACALLPSKV 60 QDPAFFWSGT VELSSTLFPL ECSTVMNKMS HMAFFKGIEE AKMFLPRDND MVDSRGCKNK 120 FDMGGVTEPA MGRSSKRIAV MVQTDTEDDE LKKMLDRLIL DGYDRYPGEM QDILITLDKE 180 NIRRHRRRGA RQMAVTDLEM LLIRCAEAVA SNNRSSASEL LERIKWHSSS RGNARQRLAH 240 YFAQALEARL AGTGRQFYQP LIGTRTSIVE LIKAHHLYSA TFCFVKVAFL FSNKTIYNAV 300 AGRRKLHIVH YGINTGLQWP DLIRWLANRE GGPPEVRMTS IDRPQPGFRL SEQIEEAGHR 360 LDNYASKFGV SIKFHAITAE PEAVRAEDLH IDPDEVLVVN SLFQFRNLID ESLDFDRVSP 420 RDKVLNTIKK MKPSAFVHAI SNGSYGSTFF MTRFPHVLHN FTAMLDVMET MIPRNNDKRL 480 QVERAFFARS AMNMIACEGA DRVEHPQNYK EWQTRSHRAG LRQLPLDPDI VLMLKEEVRN 540 RYHKHLMINE HHWWLLQGWK GRALYALSTW AADDAGGSEL T*
|