PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bradi3g36710.9.p | ||||||||
Common Name | BRADI_3g36710, LOC100838007 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | G2-like | ||||||||
Protein Properties | Length: 229aa MW: 25262.4 Da PI: 4.8209 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 31 | 5.7e-10 | 1 | 20 | 36 | 55 |
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m+v+gLtl+h+kSHLQkYRl Bradi3g36710.9.p 1 MGVQGLTLYHLKSHLQKYRL 20 99*****************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 9.0E-10 | 1 | 24 | IPR009057 | Homeodomain-like |
Pfam | PF14379 | 2.0E-15 | 69 | 108 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence Send to blast |
MGVQGLTLYH LKSHLQKYRL AVSRDLAGNA GGGSLNVDRS SSSESQSNEY NDDDDTTAEL 60 RDSSRSMAQM QREVQRKLHE QIEVQRTLQL RMEAQGRYLQ SVLRRAQQVL TDNSLAKAEL 120 SELVSAVDTE CLSSSSSQPR QQHRSAYSSC VSSSSSEAES KSAGSRRRLH AGRHQGDCCT 180 VEQPAQGKRT FPFLQQMQDA EQQAAAEAEP EEEEEAEDGS SSEFDLNM* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Bradi3g36710.9.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | FP095207 | 1e-57 | FP095207.1 Phyllostachys edulis cDNA clone: bphyem201h10, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_014755397.1 | 1e-164 | myb-related protein 2 | ||||
TrEMBL | A0A2K2D1K3 | 1e-163 | A0A2K2D1K3_BRADI; Uncharacterized protein | ||||
TrEMBL | I1I7C1 | 1e-162 | I1I7C1_BRADI; Uncharacterized protein | ||||
STRING | BRADI3G36710.1 | 1e-163 | (Brachypodium distachyon) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04030.2 | 1e-27 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Bradi3g36710.9.p |
Entrez Gene | 100838007 |