PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bradi2g33650.1.p | ||||||||
Common Name | BRADI_2g33650 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | G2-like | ||||||||
Protein Properties | Length: 199aa MW: 22450.2 Da PI: 4.627 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 60.8 | 2.7e-19 | 88 | 141 | 1 | 53 |
G2-like 1 kprlrWtpeLHerFveaveqLG.GsekAtPktilelmkvkgLtlehvkSHLQkY 53 kpr+rWt eLH++Fvea+++LG G+++ +P++i +m+v+ ++++ + SH+Q + Bradi2g33650.1.p 88 KPRVRWTRELHDKFVEAINRLGtGTDQVVPRRIFSMMDVDYISRKSIGSHMQNF 141 79*******************999****************************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.7E-17 | 86 | 141 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 6.99E-12 | 86 | 142 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.4E-17 | 88 | 141 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence Send to blast |
MAFSLLECCV TVTSVRPLSA LLLIFPKLVS AYDDTVTHVL RKNETKNHKS SGNTDADQRV 60 QAGIAEAEQG ACKEHQEELK EEENSTKKPR VRWTRELHDK FVEAINRLGT GTDQVVPRRI 120 FSMMDVDYIS RKSIGSHMQN FIEDDAFLKN SIEDDVLLKN FIEDDDLLKS FLEDDDLLKN 180 SIGDDDLLNA SSKQFVSL* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Bradi2g33650.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024311819.1 | 1e-21 | two-component response regulator ORR24 | ||||
TrEMBL | I1HL76 | 1e-143 | I1HL76_BRADI; Uncharacterized protein | ||||
STRING | BRADI2G33650.1 | 1e-144 | (Brachypodium distachyon) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31920.1 | 7e-14 | response regulator 10 |
Link Out ? help Back to Top | |
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Phytozome | Bradi2g33650.1.p |