PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bradi2g11743.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | G2-like | ||||||||
Protein Properties | Length: 413aa MW: 46484.7 Da PI: 7.1718 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 66.5 | 4.5e-21 | 204 | 257 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rl+Wt+eLH++Fv+a ++L ++ +Pk+il+lm+ + L++e+v+SHLQkYRl Bradi2g11743.2.p 204 KARLVWTEELHNNFVDAYNKL-LPKDRVPKKILRLMNDPRLSRENVASHLQKYRL 257 68*******************.88889***************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.7E-23 | 201 | 258 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.02E-14 | 202 | 257 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.3E-19 | 204 | 258 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 7.2E-6 | 207 | 256 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 413 aa Download sequence Send to blast |
MDHVPPAAPG AGGHIPLPLL MHPCPRAIVV SGDASRLHAM ETGLRQEGYK EVETYTDPTV 60 AMAMRRGRYQ LVMVDMFPLR AGALELLECA ISEMNAEAQA LSKVGNRYRK LSIRDLETIR 120 QTIKFNKSTS SEEGTLNHDD DDDDNNNNNS PTSTVSTATI GSSSGRRAPS MKMIRRHEMK 180 SQEVEQDGEH TEAQRQQLTD KSKKARLVWT EELHNNFVDA YNKLLPKDRV PKKILRLMND 240 PRLSRENVAS HLQKYRLNNL VCGEPQPIHR NDLRTQHPKL AQASLLHLNM SQVPSMMTQV 300 PTATSVYMNQ ISNPETTIIT SAKSDTDKKR MDVVVPEKIT TLARSDTNNE RVDAVVLEKM 360 YTGPQVEMEH KVDTEPRQNK IICMLGISDG SFQEDCNDIT QQTWVMNCNR DK* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Bradi2g11743.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010233072.3 | 0.0 | two-component response regulator ARR14 | ||||
TrEMBL | A0A2K2D843 | 0.0 | A0A2K2D843_BRADI; Uncharacterized protein | ||||
STRING | BRADI2G11400.1 | 2e-80 | (Brachypodium distachyon) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01760.1 | 3e-17 | response regulator 14 |
Link Out ? help Back to Top | |
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Phytozome | Bradi2g11743.2.p |