PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bradi2g11400.8.p | ||||||||
Common Name | BRADI_2g11400 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | G2-like | ||||||||
Protein Properties | Length: 242aa MW: 27488.2 Da PI: 9.5327 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 55.2 | 1.6e-17 | 181 | 232 | 1 | 53 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 k rl+Wt+eL ++Fv++ ++L ++ A+P +il+lm+ + Lt+e+++SHLQ + Bradi2g11400.8.p 181 KVRLVWTEELKKKFVNVYNKL-PPKDAVPTKILKLMNDPTLTRENIASHLQEF 232 67*******************.9999*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 4.4E-18 | 178 | 233 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.87E-13 | 179 | 235 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.4E-15 | 181 | 232 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.7E-6 | 184 | 230 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence Send to blast |
MSSMLQPGSP CPRALVVAEY ASRRHAIETR LRLLHGFEVE AYSDPTMAMA MRRGSYQRVM 60 VDMFPLRGGA VELLECAFSE MHADAYALSK VGDSYGPLSM NNIETFKRAI KFHISTSIEA 120 TPNHRSNNSA THTVSTTLSS SRRRATSREM RRQSETKIQE AEQDGEHSEE EQQPVKKESK 180 KVRLVWTEEL KKKFVNVYNK LPPKDAVPTK ILKLMNDPTL TRENIASHLQ EFETWRSAHY 240 S* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Bradi2g11400.8.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024315554.1 | 1e-172 | two-component response regulator ARR14-like | ||||
TrEMBL | A0A2K2D803 | 1e-180 | A0A2K2D803_BRADI; Uncharacterized protein | ||||
STRING | BRADI2G11400.1 | 1e-171 | (Brachypodium distachyon) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01760.1 | 1e-15 | response regulator 14 |
Link Out ? help Back to Top | |
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Phytozome | Bradi2g11400.8.p |