PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT33309
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 308aa    MW: 33428.1 Da    PI: 8.0278
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT33309genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.32.4e-072977654
              HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS
       HLH  6 nerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54
              +e+Er RR++++   ++L +l+Pk  +  +++  ++    L  A  YIk+L
  EMT33309 29 KEAERERRQHMKALCAKLTSLIPKeYF--SNPDtMTQLGSLDVAASYIKKL 77
              79**********************776..55555999************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.23E-101790IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.1052377IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.6E-122892IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-42977IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-42983IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MEMQVKAAGG GKRSRTSGGT TATRVVERKE AERERRQHMK ALCAKLTSLI PKEYFSNPDT  60
MTQLGSLDVA ASYIKKLKER VDELQHRRNS AQAMAAARGA SGASTPTTTP TTSGGAGSPE  120
GEKHWEASAP VVEVRQHDDT SMDVVLVCST ERPIMLHQVI TILEEEGAEV VNANHSVAGH  180
KIFYTIHSRA FSSRIGIDVS SVSERLRALM PKNITNLLEC NLLSTGTYVQ CFASLAEGQY  240
LANGNIGGGL HTPYTSCQRE DGSNEKMMIN CACCTYTCVA AMHGVHCVNL LSVVACMRAL  300
CFSDRWVK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3538220.0AK353822.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1003A14.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020190834.11e-152uncharacterized protein LOC109776583
TrEMBLM8CFX80.0M8CFX8_AEGTA; Transcription factor bHLH36
STRINGEMT333090.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82936133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.13e-13bHLH family protein