PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT32010
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family CAMTA
Protein Properties Length: 1095aa    MW: 122584 Da    PI: 5.7619
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT32010genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1175.37.9e-551102263118
      CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlL 102
               ke ++rwl+++ei++iL+n+++++++ e+++ p sgsl+L++rk++r+frkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een +fqrr+yw+L
  EMT32010 110 KEaQTRWLRPTEICEILKNYRNFRIAPEPPNMPASGSLFLFDRKVLRFFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHGEENINFQRRSYWML 210
               5559************************************************************************************************* PP

      CG-1 103 eeelekivlvhylevk 118
               ee++ +ivlvhylevk
  EMT32010 211 EEDYMHIVLVHYLEVK 226
               *************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143780.639105231IPR005559CG-1 DNA-binding domain
SMARTSM010763.3E-74108226IPR005559CG-1 DNA-binding domain
PfamPF038594.5E-48111225IPR005559CG-1 DNA-binding domain
SuperFamilySSF812966.86E-5523581IPR014756Immunoglobulin E-set
SuperFamilySSF484031.13E-16697801IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.202.9E-17700803IPR020683Ankyrin repeat-containing domain
CDDcd002045.69E-13700798No hitNo description
PROSITE profilePS5029717.21706800IPR020683Ankyrin repeat-containing domain
PROSITE profilePS500888.736739771IPR002110Ankyrin repeat
SMARTSM002480.013739768IPR002110Ankyrin repeat
SMARTSM002481500778807IPR002110Ankyrin repeat
SuperFamilySSF525402.92E-8909963IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.036912934IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.498913942IPR000048IQ motif, EF-hand binding site
PfamPF006120.0036914933IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0022935957IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.578936960IPR000048IQ motif, EF-hand binding site
PfamPF006122.1E-4938957IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0010150Biological Processleaf senescence
GO:0042742Biological Processdefense response to bacterium
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005516Molecular Functioncalmodulin binding
Sequence ? help Back to Top
Protein Sequence    Length: 1095 aa     Download sequence    Send to blast
MAGSGSESFT SRSVNSELIS SDPEEEMAAW LALRRSWEEA CERQRSDSFR RESIASAQMA  60
HGSAGGLRVP GGIVGTCKNR SMQMQGHRQG DTRPEYSIHA KLTDMEQILK EAQTRWLRPT  120
EICEILKNYR NFRIAPEPPN MPASGSLFLF DRKVLRFFRK DGHNWRKKKD GKTVKEAHER  180
LKSGSIDVLH CYYAHGEENI NFQRRSYWML EEDYMHIVLV HYLEVKAGKS SSRTRGHDNM  240
LQGAYVDSPL SHLPSQSTDG ESSLSGRASE YEAESGNHQG LQATSPNTGF YSHYQDNSPV  300
IHNESTHGIT FNGPSTQFDL SSWNEMTKMN KGIHQLPPYQ SHVPSEQRPF TEGPGIESFS  360
FDEVYSNGLD IKDDGHADTD REALWQLPSA NDGTTTEFLQ LPSAIDGRTT EFQLPSATDS  420
TFATVDSFEQ NNKLLEEAIN FPVLKTQSSN LSDILKNSFK KSDSFTRWMS KELAEVDDSQ  480
VKSSSALYWN SEDADNIIGA SSRDQLDQFT LDPMVAQDQL FSITEYFPSW TYAGSKTRVL  540
VTGRFLTSDE VIKLKWSCMF GEVEVPADIL ADGTLRLACS EVREFEYRPS DSQYMDAPSP  600
HGATNKIYLQ ARLDELLSLG QDEQDEFQAA LSNPTKELID LNKKITSLMT NNDQWSELLK  660
FADDNQLAPD DRQDQFVESG IKEKLHIWLL HKAGGGGKGP SVLDDEGQGV LHLAAALGYD  720
WAIRPTITAG VSINFRDVHG WTALHWAAFC GRERTVVALI ALGAAPGALT DPRPDFPSGR  780
TPADLASFNG HKGISGFLAE FSLTSHLQTL NLKEAMGSNA SEISGLPGIG DVTGRIASPS  840
AGQGLQAGSM GDSLGAVRNA AQAAARIYQV FRVQSFQRKQ AVQYEDDNGV ISDERAMSLL  900
SYKPSKPGQF DPMHAAATRI QNKFRGWKGR KEFLLIRQRI VKIQAHVRGH QVRKHYRKII  960
WSVGIVEKVI LRWRRRGAGL RGFRSTEVAT DSSTSSSSVD VIPVKPAEDD YNFLQEGRKQ  1020
TEERLQRALA RVKSMVQYPE ARDQYQRILT VVTKMQESQP VEESMLEEST EMDEGFLMSE  1080
FKELWDDDVP LPGYF
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00042PBMTransfer from AT2G22300Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3652100.0AK365210.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2032B14.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020179696.10.0calmodulin-binding transcription activator 3-like isoform X2
TrEMBLM8C3X60.0M8C3X6_AEGTA; Calmodulin-binding transcription activator 3
STRINGEMT320100.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60838140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.20.0signal responsive 1