PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT30392
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ERF
Protein Properties Length: 192aa    MW: 20175.2 Da    PI: 4.4892
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT30392genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.51.9e-142441055
       AP2 10 kkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
              +++g+Wv+eIr p     +  +r++lg++ t+e Aa+a++aa ++l+g
  EMT30392  2 RSWGSWVSEIRAP-----HqkRRIWLGSYATPEAAARAYDAALLCLKG 44
              57**********7.....335************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.81E-14151No hitNo description
Gene3DG3DSA:3.30.730.103.2E-24154IPR001471AP2/ERF domain
PROSITE profilePS5103218.94152IPR001471AP2/ERF domain
SMARTSM003801.8E-26158IPR001471AP2/ERF domain
SuperFamilySSF541714.38E-16253IPR016177DNA-binding domain
PfamPF008473.1E-8244IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MRSWGSWVSE IRAPHQKRRI WLGSYATPEA AARAYDAALL CLKGSDAVLN FPSSSSASPS  60
SPHSLPSPAD DLSPRSIQRA AAAAAAAFEA TRIVAGVVDD SCSSSAEATT PTSVSVSTLG  120
SADVQEHTTS SMSAAASARS PAGDHDELWT ELDAFASPKL MDLIAAGHAT PFSSTWEEPE  180
EDGEMMRLWS FC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3567330.0AK356733.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1039C08.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020189509.11e-133ethylene-responsive transcription factor ERF014-like
TrEMBLM8CS221e-133M8CS22_AEGTA; Ethylene-responsive transcription factor ERF012
STRINGEMT303921e-134(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108303040
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.11e-16ERF family protein