PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT26382
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family CPP
Protein Properties Length: 277aa    MW: 30123 Da    PI: 4.4477
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT26382genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR44.33.7e-1487124542
       TCR   5 gCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 
               +C+C+k++Cl++YC Cf+a ++C+e+C+C +C+N+e++
  EMT26382  87 HCTCEKTQCLQRYCHCFEAWVFCDERCSCLGCRNTEDN 124
               8*********************************9975 PP
2TCR38.62.1e-12166203239
       TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
               + kgCnC ks+C+k+YCeCf++ + Cs++ +C++C N+
  EMT26382 166 HVKGCNCCKSECKKLYCECFKHDVGCSDKFQCTGCGNT 203
               689**********************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011141.9E-983124IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163424.76184205IPR005172CRC domain
PfamPF036384.8E-1187122IPR005172CRC domain
SMARTSM011143.5E-6165206IPR033467Tesmin/TSO1-like CXC domain
PfamPF036382.8E-8168203IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MASQLTETSI MDDIHIPSEL SHMDVDLGPP TQALGGMKFQ KQIELLYCIG HLCSSETPCM  60
RLEQICLLPH LLPSDPSSLA TMDDLPHCTC EKTQCLQRYC HCFEAWVFCD ERCSCLGCRN  120
TEDNSDEVDE RAECTMKKKP DAFKPKIIDG DGPGLQEQQQ QAAGVHVKGC NCCKSECKKL  180
YCECFKHDVG CSDKFQCTGC GNTFGVKGAA QQAHSDSPEG TSCGSGETLA RLNGSSAIIN  240
DDMASQLTET SIMDDIHIPS ELSNIDVDLG PPTQALG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-116HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020148968.11e-126protein tesmin/TSO1-like CXC 2
TrEMBLM8CGR50.0M8CGR5_AEGTA; Uncharacterized protein
STRINGEMT263820.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP122672336
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04850.13e-26Tesmin/TSO1-like CXC domain-containing protein