PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT24923 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | ERF | ||||||||
Protein Properties | Length: 376aa MW: 41925.6 Da PI: 5.0137 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.7 | 9.2e-16 | 139 | 189 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GVr ++ +g+W+AeIrdp+ + +r ++g+f ++e Aa+a++a r++ + EMT24923 139 SKYPGVRLRS-WGKWAAEIRDPV----SkTRKWIGTFTSEEAAAAAYVAERNRVRT 189 89*****998.**********64....44**********99********9999876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 3.0E-8 | 139 | 187 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.32E-14 | 139 | 188 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 6.35E-12 | 139 | 170 | No hit | No description |
PROSITE profile | PS51032 | 16.081 | 140 | 199 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.2E-11 | 140 | 201 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.6E-17 | 140 | 184 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.6E-6 | 141 | 152 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.6E-6 | 163 | 179 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence Send to blast |
MSCDFQIWIW GEVLWISAFR PVPRAREVTT YKNPPNQDKL GLVVVTVNNS IISGSYLRSR 60 GLLHKEMMLP SSRKVRISCC DPDATDSSDE DDRHAKKEKR MTMEVLVPMK TSGPLKSRKT 120 LVPCGTKKSI GTEKKQPTSK YPGVRLRSWG KWAAEIRDPV SKTRKWIGTF TSEEAAAAAY 180 VAERNRVRTE MLAIKSRSPP SDHEALSSEA TVSCVSSSVS FGDQKAQEVH KLASMEIDPD 240 TADESLLHCS PEPLGKEIQV DAFLGRMNVD KSLVHCSSTP SDEEIPVDAF CSQMNELPPI 300 SDYVCTTDKL SLDDISRLAD MFPVNDFVDT TGEPPGDDYI GLADISHLPM PMFELDAQLN 360 WEGFDFASME RELEKL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020201436.1 | 0.0 | pathogenesis-related genes transcriptional activator PTI6-like | ||||
TrEMBL | M8BT05 | 0.0 | M8BT05_AEGTA; Ethylene-responsive transcription factor ERF118 | ||||
STRING | EMT24923 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5020 | 37 | 63 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72360.1 | 2e-11 | ERF family protein |