PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT23729 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | bZIP | ||||||||
Protein Properties | Length: 455aa MW: 49870.5 Da PI: 7.5694 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35 | 3.2e-11 | 179 | 207 | 5 | 33 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k rr+++NReAAr+sR+RKka+i++Le+ EMT23729 179 KTLRRLAQNREAARKSRLRKKAYIQQLET 207 7789***********************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.7E-4 | 175 | 230 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.9E-8 | 176 | 220 | No hit | No description |
PROSITE profile | PS50217 | 8.749 | 177 | 220 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.2E-8 | 179 | 207 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.88E-7 | 179 | 212 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 182 | 197 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.0E-26 | 265 | 336 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 455 aa Download sequence Send to blast |
MGGIREEDHH HHQPSELPLG FRSAPPPPMI ASSSMSKEST SYDMADFDQT AIFLYLDGHD 60 PQSIQEQRQT LNIFPSQPMH AAEPLNPAAK INGGAVMAAM LANGGNPQQA SPKRPEQQQL 120 VLQGAAGGPN ATPLLTGSAK DNKNSASLIK KEGTSSGKGA TSSSTDPDRE GSRRTQDPKT 180 LRRLAQNREA ARKSRLRKKA YIQQLETSRI RLSQIEQQVQ AGRVQGVLLG AGDHHQGLPS 240 APSFAGMFDV EYGRWVEEHS KLIFQLRALL NDNAPDNQVQ VLVGGAMAHH EELLNLKAAI 300 ARTDIFHLLC GVWASPAERC FLWLGGFRPT EFIKVMLKQV ESLSEGQLLG IYNLQRWVQE 360 TEESLNHTMG TLQHSLSDTI ASPEAAGGNF MGHMSLALNK ISSMEAIVRQ ADGLRQQTLH 420 KLHGMLTLTD FQQLLDILSS SRAKLSWLWS VGCLH |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK252400 | 0.0 | AK252400.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf157i09, mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020190892.1 | 0.0 | transcription factor TGAL7-like | ||||
Swissprot | Q6H434 | 0.0 | TGAL7_ORYSJ; Transcription factor TGAL7 | ||||
TrEMBL | M8BP47 | 0.0 | M8BP47_AEGTA; TGACG-sequence-specific DNA-binding protein TGA-2.1 | ||||
STRING | EMT23729 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2732 | 36 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 1e-100 | bZIP family protein |
Publications ? help Back to Top | |||
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