PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT22592
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 351aa    MW: 37047.3 Da    PI: 6.2265
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT22592genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY82.83.3e-26125184258
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
               dDg +WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+r++edp +++++Y+geH++
  EMT22592 125 DDGRSWRKYGQKDILGAQHPRAYYRCTYQktqGCAATKQVQRADEDPALFDVIYHGEHTC 184
               89**************************98999*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.3E-27114185IPR003657WRKY domain
PROSITE profilePS5081121.574119182IPR003657WRKY domain
SuperFamilySSF1182907.98E-24123184IPR003657WRKY domain
SMARTSM007741.5E-37124186IPR003657WRKY domain
PfamPF031069.9E-26125184IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MEAVHEGNGG GSGLVVTELS HIKELVKQLD VHLGGSPDLC KLLAQQIFAV TERSIGMIRS  60
GHFNGPKRPA AGAGLDSPPL SPTPSPLSGV SNTPFKPNKK RKTSEKGGRQ IRVSSAAGGA  120
DAPPDDGRSW RKYGQKDILG AQHPRAYYRC TYQKTQGCAA TKQVQRADED PALFDVIYHG  180
EHTCVHKTAA AAVQPAGQNP GAESLLQSLS SSLTVKTEGL TAAGAQGWSA TTPFSFSSPA  240
VSGMTPPEHH PFSTPSTPEN CFVSMPTSLE PSPATSGSNH MCMTPFHAQS ELQTMVSALV  300
EATSMPAAGT EEAAFYTFQS DWSFDDSALD VNNFDVSALD VNNFDVSVFL A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A9e-23125184968OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ2865660.0DQ286566.1 Triticum aestivum WRKY transcription factor (WRKY) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020200628.10.0WRKY transcription factor 6-like
TrEMBLM8C6D30.0M8C6D3_AEGTA; Putative WRKY transcription factor 46
STRINGEMT225920.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108638131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.13e-28WRKY DNA-binding protein 46