PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT22054 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | WRKY | ||||||||
Protein Properties | Length: 199aa MW: 20897.4 Da PI: 10.0364 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.2 | 2.6e-31 | 128 | 186 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YY+C++ gCp++k+ver+ +dp+++++tYegeH+h+ EMT22054 128 ADDFSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERDPSDPSMLIVTYEGEHRHT 186 699***********************9888****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF10533 | 7.0E-18 | 76 | 124 | IPR018872 | Zn-cluster domain |
Gene3D | G3DSA:2.20.25.80 | 7.0E-33 | 114 | 186 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.32 | 122 | 188 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.48E-26 | 124 | 186 | IPR003657 | WRKY domain |
SMART | SM00774 | 9.2E-37 | 127 | 187 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.8E-26 | 129 | 185 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:1990841 | Molecular Function | promoter-specific chromatin binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence Send to blast |
MTLDFTKASS GYGNDAGFSV SAASSSFMSS VTGDGSVSNG RGGGSSLMLP PPPSASCGKP 60 PLASSAASTG AGGGQKRKCH DHAHSENVAG GKYGASGGRC HCSKRRKSRV RRMTRVPAIS 120 SKAAEIPADD FSWRKYGQKP IKGSPYPRGY YKCSTVRGCP ARKHVERDPS DPSMLIVTYE 180 GEHRHTPADQ EPLAPLPEL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 9e-21 | 114 | 185 | 1 | 71 | WRKY transcription factor 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts, when in complex with WRKY71, specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Represses specifically gibberellic acid (GA)-induced promoters in aleurone cells, probably by interfering with GAM1. {ECO:0000250|UniProtKB:Q0JEE2}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by abscisic acid (ABA) in aleurone cells (By similarity) (PubMed:15618416). Accumulates in response to uniconazole, a gibberellic acid (GA) biosynthesis inhibitor (By similarity). Repressed by GA (PubMed:15618416). {ECO:0000250|UniProtKB:Q0JEE2, ECO:0000269|PubMed:15618416}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | JX277054 | 0.0 | JX277054.1 Triticum aestivum WRKY51 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020168943.1 | 1e-144 | WRKY transcription factor WRKY51-like | ||||
Swissprot | Q6IEN1 | 6e-97 | WRK51_ORYSI; WRKY transcription factor WRKY51 | ||||
TrEMBL | A0A2X0S5T0 | 1e-142 | A0A2X0S5T0_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A453BRY5 | 1e-142 | A0A453BRY5_AEGTS; Uncharacterized protein | ||||
STRING | EMT22054 | 1e-143 | (Aegilops tauschii) | ||||
STRING | Traes_2AL_434E9F101.1 | 1e-142 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP617 | 38 | 171 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.1 | 2e-42 | WRKY DNA-binding protein 11 |