PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT21046
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family GATA
Protein Properties Length: 82aa    MW: 9182.69 Da    PI: 10.9058
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT21046genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA35.91e-112753935
      GATA  9 TplWRrgpdgnktLCnaCGlyyrkkgl 35
              TplWR+gp  ++  CnaCGl +r kg+
  EMT21046 27 TPLWRNGPPDKPVFCNACGLIWRIKGT 53
              ********55555**********9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004010.00161268IPR000679Zinc finger, GATA-type
SuperFamilySSF577168.08E-82559No hitNo description
PfamPF003201.4E-92653IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.101.3E-92653IPR013088Zinc finger, NHR/GATA-type
PROSITE profilePS501148.7872752IPR000679Zinc finger, GATA-type
CDDcd002027.57E-92753No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    Send to blast
MPMRATVTEQ VKRRVQIAEE PPSRAGTPLW RNGPPDKPVF CNACGLIWRI KGTLVNYMRA  60
HRREDTGAGE AGPDKLKLKG QK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020167263.15e-37GATA transcription factor 27-like
TrEMBLM8CD275e-54M8CD27_AEGTA; GATA transcription factor 28
STRINGEMT210468e-55(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44243464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.21e-17GATA transcription factor 26