PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT19786 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | G2-like | ||||||||
Protein Properties | Length: 337aa MW: 36518.1 Da PI: 8.0041 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 70.5 | 2.6e-22 | 97 | 141 | 2 | 46 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehv 46 pr+rWt+ LH++Fv+ave LGG+e+AtPk++lelm+vk+Ltl+h+ EMT19786 97 PRMRWTTALHAHFVRAVELLGGHERATPKSVLELMNVKDLTLAHM 141 9*****************************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.52E-8 | 94 | 140 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 7.3E-19 | 94 | 141 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.8E-14 | 97 | 140 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0080060 | Biological Process | integument development | ||||
GO:0005618 | Cellular Component | cell wall | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 337 aa Download sequence Send to blast |
MSTPPPPLPE ACSITMAVAP DLSLHISPPS PDTAVGHNGE VRLGLHESAA KRHRGLEEML 60 HQPNKAHGFK KSSCPDVGGG AVARPAAGGR KRSSRAPRMR WTTALHAHFV RAVELLGGHE 120 RATPKSVLEL MNVKDLTLAH MYRTVKGTDR SCVAGHGQTR DMGFLRRVVA GDELINGFDG 180 FNSNMVNTTS NYTTPRRSES PAGEQGHHDA WRTQAAAAAA TTTIMVPPYL TTSEPHDNEH 240 IMPENGMARP AAPRRGRPSP NNTSSSGSDD VDETESFGWL ALTRRRYDED CAGDRVLQDA 300 AMVMAPSLEM RLGRQGWEQM EPSASASKEL TPIVRCL |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00107 | PBM | Transfer from AT5G42630 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK364054 | 0.0 | AK364054.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2021D04. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020183178.1 | 0.0 | probable transcription factor KAN4 | ||||
TrEMBL | R7WBK2 | 0.0 | R7WBK2_AEGTA; Putative Myb family transcription factor | ||||
STRING | EMT19786 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3742 | 31 | 68 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42630.2 | 1e-28 | G2-like family protein |