PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT18977 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | bZIP | ||||||||
Protein Properties | Length: 154aa MW: 17093.2 Da PI: 9.0804 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.4 | 1.3e-12 | 30 | 89 | 3 | 62 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e +r rrk++NRe+ArrsR RK++ ++ L v++L+++ +++ l + +++ +l+++ EMT18977 30 EKRRKRRKESNRESARRSRVRKQQHLDDLSSQVDQLKNQSQQMNMVLGMTTQNLVALQAQ 89 5689*************************************9998888777776666665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.4E-11 | 28 | 92 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.645 | 30 | 93 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.3E-9 | 30 | 78 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.1E-9 | 32 | 89 | No hit | No description |
SuperFamily | SSF57959 | 3.87E-11 | 32 | 87 | No hit | No description |
CDD | cd14702 | 7.58E-15 | 33 | 72 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 35 | 50 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence Send to blast |
MSSGTSFASS QGTRSSRSAE DCPDLRAQME KRRKRRKESN RESARRSRVR KQQHLDDLSS 60 QVDQLKNQSQ QMNMVLGMTT QNLVALQAQN SVMQTQKMEL ESRLCALGEI ICCMNSITNT 120 VNPTAAMGAT ASSAYDVFGA GSAWSQPIDL YQCF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 30 | 36 | KRRKRRK |
2 | 32 | 37 | RKRRKE |
3 | 44 | 50 | RRSRVRK |
4 | 44 | 51 | RRSRVRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK364428 | 0.0 | AK364428.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2025A24. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020172439.1 | 1e-111 | bZIP transcription factor 44-like | ||||
TrEMBL | A0A3B6MQY4 | 1e-109 | A0A3B6MQY4_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A453KL05 | 1e-109 | A0A453KL05_AEGTS; Uncharacterized protein | ||||
TrEMBL | R7W9Q0 | 1e-109 | R7W9Q0_AEGTA; Ocs element-binding factor 1 | ||||
STRING | EMT18977 | 1e-110 | (Aegilops tauschii) | ||||
STRING | Traes_5DL_67A38E9B7.1 | 1e-110 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3740 | 32 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.1 | 9e-12 | basic leucine-zipper 44 |