PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT17938

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

bZIP

Protein Properties

Length: 309aa MW: 34620.3 Da PI: 9.7494

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT17938	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.6	4.8e-12	227	273	3	46
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeaeNkaLk 46 + k rr+++NReAAr+sR+RKka+i++Le+ + ++e+e+++ EMT17938 227 DAKTLRRLAQNREAARKSRLRKKAYIQNLETsrvRLSQMEQEMQRCS 273 67999************************973335556666665555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	7.4E-10	225	277	No hit	No description
SMART	SM00338	1.1E-7	225	288	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.082	227	277	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.3E-9	228	271	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.06E-8	231	279	No hit	No description
PROSITE pattern	PS00036	0	232	247	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence Send to blast
MPEMTKSWQN SGFYAPDLLT GVDVGMPPFK NSLSQELKSW SWRQTWPRKL DSLCKRSTET 60 PRLQPRRDAD SEDPLERKIQ VFTVCNHSLI FLVHALHLRL YKSSSILCQL PCSRKDPGGY 120 EDLAELDQAL FLYINSQDQQ SVQEQPQTLN IFPSRPMHVV AEPSPKAATS TSNIVAASSN 180 LKPQRPPSKQ SAMTAPGGKA TVKREGSGSG GAGTPSTSEH EGPRTPDAKT LRRLAQNREA 240 ARKSRLRKKA YIQNLETSRV RLSQMEQEMQ RCSAQLQHIQ MWTCCAEEAA PAKFFPVQSY 300 LPELKQTGP

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK368931	0.0	AK368931.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2082I06.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020178470.1	1e-108	transcription factor TGAL9-like isoform X3
Swissprot	Q0E342	6e-50	TGAL9_ORYSJ; Transcription factor TGAL9
TrEMBL	R7W916	0.0	R7W916_AEGTA; Transcription factor HBP-1b(C38)
STRING	EMT17938	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2732	36	69

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06839.3	4e-28	bZIP family protein

Publications ? help Back to Top
Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709]