PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT17221 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | bZIP | ||||||||
Protein Properties | Length: 381aa MW: 40708.1 Da PI: 9.7826 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 62.2 | 1e-19 | 300 | 362 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e+k+++rkq+NRe+ArrsR+RK+ae ee + +++ L++eN++Lk+el++l++++++l+se+ EMT17221 300 EREVKKQKRKQSNRESARRSRLRKQAEWEEVASRADLLKQENSSLKEELKQLQEKCDNLTSEN 362 799**********************************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 3.1E-28 | 1 | 101 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 1.6E-12 | 140 | 268 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 6.3E-15 | 295 | 358 | No hit | No description |
Pfam | PF00170 | 6.8E-18 | 300 | 362 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 8.5E-20 | 300 | 364 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.449 | 302 | 365 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.06E-9 | 303 | 359 | No hit | No description |
CDD | cd14702 | 4.61E-22 | 305 | 356 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 307 | 322 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 381 aa Download sequence Send to blast |
MGKGDVATRS KSQKSLTAQN EQSTPTNPPT AYPDWSQFQA YYNVPGTTQM TPPAYFHSTV 60 APSPQGHPYM WGPQMMPPYG TPPPYATMYA QGTPYQQAPM PPGSHPYSPY PVQAPNGTVQ 120 TPTSGAGGSE TDKSNKNKRK TPLKRSKGSL GSLDVVTVKD KTPPAKPLVS SSNEGSSQSK 180 SGSGSYSGGS STNSKSGSHT KDGSEHGPAN DASNKGVTAQ GTAVEPTQVS SGPVVLNPMM 240 PYWPVPPPMP GQATGVSMGV DYWGAPTSVP MHGKAVAAPT SAPSSNSRDI VLSDPVIQDE 300 REVKKQKRKQ SNRESARRSR LRKQAEWEEV ASRADLLKQE NSSLKEELKQ LQEKCDNLTS 360 ENTSLHEKLK ALDSEKPNGN L |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 316 | 322 | RRSRLRK |
2 | 316 | 323 | RRSRLRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | WHTHBP1AC | 0.0 | D12920.2 Triticum aestivum mRNA for transcription factor HBP-1a(c14), complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020189439.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
Refseq | XP_020189441.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
Refseq | XP_020189442.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
Refseq | XP_020189443.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
TrEMBL | A0A453IJF6 | 0.0 | A0A453IJF6_AEGTS; Uncharacterized protein | ||||
TrEMBL | N1QZS7 | 0.0 | N1QZS7_AEGTA; G-box-binding factor 1 | ||||
STRING | EMT17221 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP11506 | 32 | 38 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35530.1 | 7e-60 | basic region/leucine zipper transcription factor 16 |