PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT16461 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | bHLH | ||||||||
Protein Properties | Length: 206aa MW: 21697.2 Da PI: 8.5935 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.7 | 0.00048 | 158 | 196 | 11 | 54 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +R +++ +++ L++l+ + +K + a++L +A +I++L EMT16461 158 KRSQKLGDKITALQQLVSPY-----GKTDTASVLHEAAACIRNL 196 7899999**********999.....9****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 9.642 | 147 | 196 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.14E-7 | 158 | 203 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.6E-5 | 158 | 202 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence Send to blast |
MWNCSAPSPL LLPFSDDYVK CESSSSAPGS AGFDGIRIAA DYGHLCHHMS SLQSLPAPAL 60 FATRSSESYF GMGDGSAYGG DGRPAAFMHF GYAQTQPPTA ATHPVRWTAA GGESEPVVCD 120 GSSFSGSKRR KTTTTDSRLQ GSNAKPRNTT AAAKAPCKRS QKLGDKITAL QQLVSPYGKT 180 DTASVLHEAA ACIRNLHDQI QVTAAR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020180445.1 | 1e-149 | transcription factor bHLH123-like | ||||
TrEMBL | R7W639 | 1e-151 | R7W639_AEGTA; Transcription factor bHLH113 | ||||
STRING | EMT16461 | 1e-152 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3758 | 24 | 26 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19500.1 | 2e-15 | bHLH family protein |