PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT15453
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 283aa    MW: 30825.8 Da    PI: 8.6355
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT15453genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.92.2e-11127102128
       NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
               +kktLvfy+grap+gekt+Wv+heyrl
  EMT15453   1 MKKTLVFYRGRAPRGEKTKWVLHEYRL 27 
               8************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.074181IPR003441NAC domain
SuperFamilySSF1019419.15E-13137IPR003441NAC domain
SuperFamilySSF1019419.15E-136981IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009855Biological Processdetermination of bilateral symmetry
GO:0009965Biological Processleaf morphogenesis
GO:0010014Biological Processmeristem initiation
GO:0010073Biological Processmeristem maintenance
GO:0010199Biological Processorgan boundary specification between lateral organs and the meristem
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MKKTLVFYRG RAPRGEKTKW VLHEYRLDGD FGAGRRSCKG FVSAQKSSCR FALTPDASEL  60
ASDMSIHHVL EEWVVCRIFH KAVDPYSKMM EMRNPYCYFP MSPHHPSFFQ DAPPVPFPNP  120
SQLIPFHHDL PNLQSSPLMQ SQGQAKNTSG NNGGFPAAAC VQEQPNSSCN QAYFPFPPFA  180
SIVNGKAGPP AQPRSQGQAK NTSGNNGGFP AAACVQEQPN SSCNQAYFPF PPFASIVNGK  240
AGPPAQPRVN GGPQEPPPTW LDACLQHSAF MYEMGPPAAT RGA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3754321e-155AK375432.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3094D13.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020165224.11e-127protein CUP-SHAPED COTYLEDON 3-like
TrEMBLN1R0G90.0N1R0G9_AEGTA; Protein CUP-SHAPED COTYLEDON 3
STRINGEMT154530.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP112373341
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76420.12e-15NAC family protein