PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT14634
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WOX
Protein Properties Length: 285aa    MW: 31693.8 Da    PI: 9.5761
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT14634genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox43.55.6e-1444102557
               SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHH.HHHHHC CS
  Homeobox   5 ttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNr.Rakekk 57 
               + +t+eq+++Le l+++  r+p+aee+ + +++l     ++ ++V++WF Nr R+k+k+
  EMT14634  44 WVPTREQITVLEGLYRQgMRTPTAEEIHQVTARLqehgPIEGKNVFYWFENRlRQKQKQ 102
               899*************99****************99999*************9999986 PP
2Wus_type_Homeobox87.31.7e-2842102465
  Wus_type_Homeobox   4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        + W Pt eQi++Le ly++G+rtP++eei+++ta+L+e+G ie+kNVfyWF Nr  R++qkq
           EMT14634  42 ACWVPTREQITVLEGLYRQGMRTPTAEEIHQVTARLQEHGPIEGKNVFYWFENR-LRQKQKQ 102
                        67***************************************************7.5777775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466895.53E-844106IPR009057Homeodomain-like
PfamPF000461.0E-1144102IPR001356Homeobox domain
PROSITE profilePS500718.9447102IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008284Biological Processpositive regulation of cell proliferation
GO:0009942Biological Processlongitudinal axis specification
GO:0010654Biological Processapical cell fate commitment
GO:0048825Biological Processcotyledon development
GO:0090451Biological Processcotyledon boundary formation
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MESVEHHDEA ATGLSLSPPP TSAPLSPLIS PNSAAVSALA NACWVPTREQ ITVLEGLYRQ  60
GMRTPTAEEI HQVTARLQEH GPIEGKNVFY WFENRLRQKQ KQQQQRSDYF ARQLRRPQPL  120
PTLRRTPGKP FSPVQLQAPP APNPPACNRE AMYMQQPCYM SGPAAQAAAN ATYYSQMQTH  180
IMYPTAEMMA HGNVQAQAQA AMYYQAASPN NSNTQQMRVL QFPPAAGSYG AHDAYSHRPV  240
LLNLFPQYPT FANRKKTRCV GSVGSARPST SRSISWEMES PKIPD
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor which may be involved in developmental processes. {ECO:0000250}.
UniProtTranscription factor which may be involved in developmental processes. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020175042.10.0WUSCHEL-related homeobox 5-like
SwissprotA2WWU78e-38WOX5_ORYSI; WUSCHEL-related homeobox 5
SwissprotQ8LR868e-38WOX5_ORYSJ; WUSCHEL-related homeobox 5
TrEMBLA0A453FWD70.0A0A453FWD7_AEGTS; Uncharacterized protein
TrEMBLR7W9P10.0R7W9P1_AEGTA; WUSCHEL-related homeobox 5
STRINGEMT146340.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75093548
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.12e-20WUSCHEL related homeobox 2