PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT13093
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bZIP
Protein Properties Length: 587aa    MW: 61940.8 Da    PI: 10.2645
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT13093genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.56.9e-14112171362
               XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
               + +r+ r+++NRe+A+ sRqRKk ++eeLeekvk++ +   +L ++++ +  e a+l+++
  EMT13093 112 DTRRAARLIRNRESAQLSRQRKKRYVEELEEKVKSMNSVINDLNSKISFIVAENATLRQQ 171
               6799***********************************99******9999999988887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-13110174IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.036112172IPR004827Basic-leucine zipper domain
PfamPF001705.1E-12112172IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.56E-12114172No hitNo description
Gene3DG3DSA:1.20.5.1701.4E-15114172No hitNo description
CDDcd147041.83E-19115166No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042538Biological Processhyperosmotic salinity response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005783Cellular Componentendoplasmic reticulum
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    Send to blast
MTRGPGTKRR SDSAEGSAAG SGPTASLSSP AASGTGSAVA DASCEVKHEE SDEGRSAAAP  60
SWGLKRKPAS PAPSSEAAKC RRSGDGEVSP SASASRPAVD SDEGGAVGEG EDTRRAARLI  120
RNRESAQLSR QRKKRYVEEL EEKVKSMNSV INDLNSKISF IVAENATLRQ QLGSGGGNCA  180
PPGMYPPGAV PGMHFPWVPG YAMRPHGSHV PLVPIPRLKP QQQVTATKAT KKPENKKAVD  240
SKSKSKTKTK KVASVSLLGL MLVMLVFGAF VPGFNHNFGL SGGSDNAMFR NFGQPHDRVV  300
NVNNHGQAPK GGLNNSDMTG VDSGMMIGTD GSADQKHQPP LNSSETLPAL LYVPRNGKHV  360
KINGNLIIHS VLASEKAVAH GTSQHNRDQS GIDHKETSTA IARHLSLPGN NMNPQEKSPV  420
DGPLPQWFRE GMAGPILNSG MCSEVFQFDV SAATNSGGII PASPAVNSSS VNATRKVPTP  480
APAYYGKLKN RRIMYNEAIP LTGKTANNTG PFNRTSESSK LPDKKPASSV VVSVLADPRE  540
AGDGDSDPRM TPKSLSRIFV VVLLDGVRYV TYSCTLPFKS ASPHLVN
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22084314}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000269|PubMed:22084314}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3626280.0AK362628.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2008O22.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020152277.10.0bZIP transcription factor 39-like
SwissprotQ6AU900.0BZP39_ORYSJ; bZIP transcription factor 39
TrEMBLR7W2I20.0R7W2I2_AEGTA; Putative TGACG-sequence-specific DNA-binding protein TGA-1B
STRINGEMT130930.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82283545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.14e-90bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Cheng CH, et al.
    A fine physical map of the rice chromosome 5.
    Mol. Genet. Genomics, 2005. 274(4): p. 337-45
    [PMID:16261349]
  3. Takahashi H,Kawakatsu T,Wakasa Y,Hayashi S,Takaiwa F
    A rice transmembrane bZIP transcription factor, OsbZIP39, regulates the endoplasmic reticulum stress response.
    Plant Cell Physiol., 2012. 53(1): p. 144-53
    [PMID:22084314]
  4. Ohta M, et al.
    Analysis of rice ER-resident J-proteins reveals diversity and functional differentiation of the ER-resident Hsp70 system in plants.
    J. Exp. Bot., 2013. 64(18): p. 5429-41
    [PMID:24153418]
  5. Cheng Q, et al.
    An alternatively spliced heat shock transcription factor, OsHSFA2dI, functions in the heat stress-induced unfolded protein response in rice.
    Plant Biol (Stuttg), 2015. 17(2): p. 419-29
    [PMID:25255693]