PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT10807
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 301aa    MW: 34669.6 Da    PI: 7.4828
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT10807genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.0001101123223
               EETTTTEEESSHHHHHHHHHH.T CS
   zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
               +C+ C+++++++ +L  Hi+  H
  EMT10807 101 SCSVCSRVYPTSRLLSIHISEaH 123
               6******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM00355117398IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002807598IPR007087Zinc finger, C2H2
SMARTSM003555100123IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280102123IPR007087Zinc finger, C2H2
SMARTSM00355300138157IPR015880Zinc finger, C2H2-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MEVSAPSEAE APKDAGPWLG FWEVSRRRLT PDDPFFAAGD MERELLAKHV ALDLSDDDRY  60
QLEKMDVASV SMVCCPIAGC GAHLDCLEDF EDHYSTRHTA SCSVCSRVYP TSRLLSIHIS  120
EAHDSFFQAK VARGFPMGCG EKLKTYKSRQ QHLVDKHQFP NSFEFFKRAQ PSQRHRQKYH  180
HRRQTAYKGE ETRDTVMDVD GKNPRQSKSR YRPKQHDHKE SKEKEHDHKE SKENEHHEKE  240
AKESDMEVEQ KIDELSFAVS RLSTADSVPS SITFGHRRAR GLTFVPRSIR QNKQVSQPEA  300
N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020201569.10.0zinc finger protein 511
TrEMBLM8B2600.0M8B260_AEGTA; Zinc finger protein 511
STRINGEMT108070.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP109112629
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14140.14e-79zinc ion binding;nucleic acid binding;zinc ion binding