PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT10262

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

VOZ

Protein Properties

Length: 458aa MW: 51895 Da PI: 5.8481

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT10262	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	420.6	2.5e-129	163	380	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdlsl 100 p+p++fl+pkcalwdc+rpaqgse +qdycs++ha+la++e g+pgt+pv+rp+gidlkdg+lfaalsak+qgk+vg+p+cegaat+kspwna+elfdl + EMT10262 163 PAPASFLRPKCALWDCPRPAQGSESWQDYCSMYHAELAVKEeGPPGTMPVIRPRGIDLKDGPLFAALSAKIQGKHVGVPVCEGAATTKSPWNAPELFDLYI 263 89***********************************9879****************************************************** PP VOZ 101 legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgkvs 201 +ege++rewlffdkprraf+sgnrkqrslpdy+grgwhesrkqvmk+fgglkrsyymdpqpsss+ewhlyeyein+ da+alyrle+k++++kksak+k + EMT10262 264 FEGESMREWLFFDKPRRAFDSGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKRSYYMDPQPSSSYEWHLYEYEINDRDAFALYRLEFKSSEAKKSAKSKFT 364 ************************************************************************************************* PP VOZ 202 kdsladlqkklgrlta 217 +++l ++q++++rl+a EMT10262 365 CSPLIEIQQQMVRLSA 380 ************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence Send to blast
MRKGPSRSGS ARHQQFRARA KTRVDDLQDM FSGLQYARKE ARSTDAVLLE AQLHQMLREW 60 RAELSVPSPA SSLQAVVFSP EMYYVNQELS VEDFLYDDDY KINLPGSNPE ILNNLEGIGH 120 QEYLQFNLPQ ELPPNAYLDM NNYGQNAGDG FLHMSDLLTT MSPAPASFLR PKCALWDCPR 180 PAQGSESWQD YCSMYHAELA VKEEGPPGTM PVIRPRGIDL KDGPLFAALS AKIQGKHVGV 240 PVCEGAATTK SPWNAPELFD LYIFEGESMR EWLFFDKPRR AFDSGNRKQR SLPDYNGRGW 300 HESRKQVMKD FGGLKRSYYM DPQPSSSYEW HLYEYEINDR DAFALYRLEF KSSEAKKSAK 360 SKFTCSPLIE IQQQMVRLSA DGHVENKRTA RVRTQDVSTN IYPVQNNTAQ ASAPDAYQAA 420 SQVDQMTFLN GSVVYGPHLP YGYSTEGGDF YWNSNDGA

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence Send to blast

MRKGPSRSGS ARHQQFRARA KTRVDDLQDM FSGLQYARKE ARSTDAVLLE AQLHQMLREW  60
RAELSVPSPA SSLQAVVFSP EMYYVNQELS VEDFLYDDDY KINLPGSNPE ILNNLEGIGH  120
QEYLQFNLPQ ELPPNAYLDM NNYGQNAGDG FLHMSDLLTT MSPAPASFLR PKCALWDCPR  180
PAQGSESWQD YCSMYHAELA VKEEGPPGTM PVIRPRGIDL KDGPLFAALS AKIQGKHVGV  240
PVCEGAATTK SPWNAPELFD LYIFEGESMR EWLFFDKPRR AFDSGNRKQR SLPDYNGRGW  300
HESRKQVMKD FGGLKRSYYM DPQPSSSYEW HLYEYEINDR DAFALYRLEF KSSEAKKSAK  360
SKFTCSPLIE IQQQMVRLSA DGHVENKRTA RVRTQDVSTN IYPVQNNTAQ ASAPDAYQAA  420
SQVDQMTFLN GSVVYGPHLP YGYSTEGGDF YWNSNDGA

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK363185	0.0	AK363185.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2013F10.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020201118.1	0.0	transcription factor VOZ1-like
Swissprot	Q9SGQ0	1e-143	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	M8B0L0	0.0	M8B0L0_AEGTA; Uncharacterized protein
STRING	EMT10262	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2343	38	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-138	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]