PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT10168
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WOX
Protein Properties Length: 294aa    MW: 31923.8 Da    PI: 7.5768
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT10168genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox46.94.7e-152787257
              T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
  Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
              r+R+++++eq+ +Le+ F++   +p ++e +++   l     + +++V++WFqNrR + ++
  EMT10168 27 RSRWAPKPEQILILESIFNSgMVNPAKDETARIRLLLerfgAVRDANVFYWFQNRRSRSRR 87
              89*****************99*************************************997 PP
2Wus_type_Homeobox104.19.1e-342688264
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       ar+RW+P+peQi iLe++++sG+++P+k+e+ ri+  Le++G+++d+NVfyWFQNr++R+r++
           EMT10168 26 ARSRWAPKPEQILILESIFNSGMVNPAKDETARIRLLLERFGAVRDANVFYWFQNRRSRSRRR 88
                       789**********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-82192IPR009057Homeodomain-like
SuperFamilySSF466897.7E-132193IPR009057Homeodomain-like
PROSITE profilePS5007111.1272388IPR001356Homeobox domain
SMARTSM003899.8E-52592IPR001356Homeobox domain
PfamPF000468.3E-132787IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048830Biological Processadventitious root development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MDQHNHGQAP AHRGGRSSEG GEPTTARSRW APKPEQILIL ESIFNSGMVN PAKDETARIR  60
LLLERFGAVR DANVFYWFQN RRSRSRRRAR QLQQSCGGSG DADQLPSNAV VAGHGCHGIG  120
TSPYNTMQYG QLCGGVSAAA AAVTGAPRFS VDDADGGDDL FAIPRQMGLM SRGGENQYGY  180
TATDASQLSY QATVPGTTMP VFINGTVYEV PSTGVLDVAG TFGSDVILVH SSGEILPVNE  240
RGVLMKSLQM GECYYLVINH FLSNQGIQVD LINQLLSSRL EESRSRYMYA RKML
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor which may be involved in developmental processes. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3651740.0AK365174.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2031K13.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020200216.10.0WUSCHEL-related homeobox 10-like
SwissprotA2YST13e-86WOX10_ORYSI; WUSCHEL-related homeobox 10
TrEMBLM8C4V10.0M8C4V1_AEGTA; WUSCHEL-related homeobox 10
STRINGEMT101680.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP107837109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03660.11e-28WUSCHEL related homeobox 11