PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT09164
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family Trihelix
Protein Properties Length: 442aa    MW: 50238.1 Da    PI: 6.585
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT09164genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix82.55.6e-26118214186
  trihelix   1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 
               +Wt+++v++Li+a ++++e+ +++            kk++W+++sk+m erg+++sp+qC++k+++lnkryk+++++ +++ t++++++ +++d+++
  EMT09164 118 KWTDSMVKLLITAASYTGEDPGADLgcgrrncamvHKKGKWKAISKVMGERGCNVSPQQCEDKFNDLNKRYKRLTDILGRGtTCKVVENPALLDRMD 214
               7*********************8633466677888**********************************************77*************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.7E-20116240No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MEGNNLPPGN FMQGATYGSS DLHRNPMQMH GPSSDNPGFN HSQIPGKFPM PMNQVTASDH  60
LSEFQFREQR KADHHQVHHH HYPKKDSMSD DEEHGLNEDT TDSHSGKGKK GSAWQRMKWT  120
DSMVKLLITA ASYTGEDPGA DLGCGRRNCA MVHKKGKWKA ISKVMGERGC NVSPQQCEDK  180
FNDLNKRYKR LTDILGRGTT CKVVENPALL DRMDNLSDKL KDDARKILSS RHLFYEEMCS  240
YHNNNRISLP EDPALQRSLQ FALRCKEEND MMRGASGDAD EDDQSSDSDY EEDNDEDHQV  300
AHSNKGGLPM QKKMWYTADH EDAGFGNSLS AHECSRRSNP HGITLDINKV VPDGTSLALT  360
QKDLVLQSAE LEKQCLKIEN EALELAEQRL KWELSSKIKD KELERMRSDN EHMKIEIKRL  420
KLEVRRKELE LELKLKGNGS HS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020196126.10.0uncharacterized protein LOC109781950
RefseqXP_020196127.10.0uncharacterized protein LOC109781950
RefseqXP_020196128.10.0uncharacterized protein LOC109781950
TrEMBLA0A3B6MNK50.0A0A3B6MNK5_WHEAT; SAB
TrEMBLA0A453K8U80.0A0A453K8U8_AEGTS; Uncharacterized protein
TrEMBLM8BQV90.0M8BQV9_AEGTA; Uncharacterized protein
STRINGEMT091640.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29203886
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.18e-96sequence-specific DNA binding transcription factors