PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT09004
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bZIP
Protein Properties Length: 446aa    MW: 46559.8 Da    PI: 6.3524
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT09004genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.81.5e-10384409126
               XXXXCHHHCHHHHHHHHHHHHHHHHH CS
    bZIP_1   1 ekelkrerrkqkNReAArrsRqRKka 26 
               e+e+krerrkq+NRe+ArrsR+RK++
  EMT09004 384 EREIKRERRKQSNRESARRSRLRKQE 409
               89***********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165967.6E-8124231No hitNo description
Gene3DG3DSA:1.20.5.1701.0E-6381409No hitNo description
PfamPF001709.8E-8384409IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.19E-5387410No hitNo description
CDDcd147025.64E-11389420No hitNo description
PROSITE patternPS000360391406IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    Send to blast
MASSSDEQPK PPEPPAAAVA VATTAPQSHS EWAASMQAFY ASGGHPYAAW PAQLMAAAAA  60
SGTSYGAPVP FPMYHPGAAM AYYAHASMAA GVPYPTAEAV AAAAAAPVVA EGKGKAKGGG  120
VSPEKGSSAA PSGDDASQSC ESGSDESSDT RDYDTDQKDS SAPKKRKSGN TSAEGEPSQA  180
AAVPYAAVES PYQLKGRSAS KLPVSAPGRA ALPNATPNLN IGIDLWSASQ SLAVIPVQGE  240
ANPGLALARC DGVGQLDSST PGYIQFQSQE EHMVVVHQHI AALAAGKECV DDEQLHTSWH  300
PAGVEELVPP SARTSWCLTT INKESSSSVA AVDEVSAQPP ALACWRVTTT NVKSAQPATP  360
VARSSSVDTD RKSPQGRLVR MLDEREIKRE RRKQSNRESA RRSRLRKQEL GDLNYDIAVL  420
CQKLLYPGFP TVGIVKHIEN MSSCTV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1400406RRSRLRK
2400407RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankWHTHBP1ALZ0.0D64051.1 Triticum aestivum mRNA for HALF-1, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020159007.11e-178DNA-binding protein EMBP-1-like isoform X3
TrEMBLM8BQE90.0M8BQE9_AEGTA; DNA-binding protein EMBP-1
STRINGEMT090040.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.27e-10G-box binding factor 1