PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT07674

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

G2-like

Protein Properties

Length: 700aa MW: 77479.5 Da PI: 5.0761

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT07674	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	37.5	5.1e-12	566	592	1	27
G2-like 1 kprlrWtpeLHerFveaveqLGGsekA 27 k r+rWtpeLHe+Fv+av++LGGse + EMT07674 566 KSRMRWTPELHEKFVDAVDKLGGSEST 592 68*********************9864 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF11107	1.8E-30	4	217	No hit	No description
Pfam	PF11107	4.0E-5	230	303	No hit	No description
SuperFamily	SSF46689	9.14E-5	563	600	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	9.8E-10	564	593	IPR009057	Homeodomain-like
Pfam	PF14379	7.4E-15	611	657	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006661	Biological Process	phosphatidylinositol biosynthetic process
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 700 aa Download sequence Send to blast
MAAMEEVLAL VPGFVDILVL AGGRTSPGAA AAWRPGDVQK ALRWALFFEE IFRNLRDSGQ 60 YEDSVREFDA ALVELASSPG FPKGLADMRS ETLSAATELV IKHFLKAETT SVENIRAVLE 120 AVVGMDIDGI GAGGMRDACQ EYVKSILNMD LSDLTRTKSG GDVRVPTTSS DRLYAESLVV 180 GHSRILVNQL LERLDSASCI SLAERGLRTL LDSVKKNSFS DPGSPVIPSF IFSAPKEQWM 240 KVFEPLTVSV DSCQSGLVEV MEICLLGLVS RRWDPLIESF VSHTFSSLPI SKQYADLHQL 300 LQGTYRGECP DKILNLKEND ILEYARQSLE SKPHILWLLP PVLAAAAIPP RSTLFEIYLA 360 EIDKQFDEAV STERCSFSYK MRRCIVLDKP YMSASNFTSD LCINNGSPKG KLSFGSHVIA 420 ISGCDTSLPS AHSSYTGNPD YLRMVYPKVS EEINWGQEPL PGVFEYPATI DVSDQRNVIV 480 SQQSQDIITI DHITHLAKQK EWYSSGCSEQ FLGSSGSGGS VLKAADANTT PPNYAYFHGQ 540 KNRLSSFNVD ELCSDNLPCS DTTPTKSRMR WTPELHEKFV DAVDKLGGSE STSAERSNHM 600 DEVCSQNMKH MEASEGLRTQ IGLQKQLHAQ LELQRKMQLQ VEEHSKYLEM VIARQGESLK 660 QLGALPRFQH SNTQSVDHKE AYREQTADTD SAEGSHPEKE

Sequence ? help Back to Top

Protein Sequence Length: 700 aa Download sequence Send to blast

MAAMEEVLAL VPGFVDILVL AGGRTSPGAA AAWRPGDVQK ALRWALFFEE IFRNLRDSGQ  60
YEDSVREFDA ALVELASSPG FPKGLADMRS ETLSAATELV IKHFLKAETT SVENIRAVLE  120
AVVGMDIDGI GAGGMRDACQ EYVKSILNMD LSDLTRTKSG GDVRVPTTSS DRLYAESLVV  180
GHSRILVNQL LERLDSASCI SLAERGLRTL LDSVKKNSFS DPGSPVIPSF IFSAPKEQWM  240
KVFEPLTVSV DSCQSGLVEV MEICLLGLVS RRWDPLIESF VSHTFSSLPI SKQYADLHQL  300
LQGTYRGECP DKILNLKEND ILEYARQSLE SKPHILWLLP PVLAAAAIPP RSTLFEIYLA  360
EIDKQFDEAV STERCSFSYK MRRCIVLDKP YMSASNFTSD LCINNGSPKG KLSFGSHVIA  420
ISGCDTSLPS AHSSYTGNPD YLRMVYPKVS EEINWGQEPL PGVFEYPATI DVSDQRNVIV  480
SQQSQDIITI DHITHLAKQK EWYSSGCSEQ FLGSSGSGGS VLKAADANTT PPNYAYFHGQ  540
KNRLSSFNVD ELCSDNLPCS DTTPTKSRMR WTPELHEKFV DAVDKLGGSE STSAERSNHM  600
DEVCSQNMKH MEASEGLRTQ IGLQKQLHAQ LELQRKMQLQ VEEHSKYLEM VIARQGESLK  660
QLGALPRFQH SNTQSVDHKE AYREQTADTD SAEGSHPEKE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020193212.1	0.0	uncharacterized protein LOC109779044 isoform X1
Refseq	XP_020193213.1	0.0	uncharacterized protein LOC109779044 isoform X1
Refseq	XP_020193214.1	0.0	uncharacterized protein LOC109779044 isoform X1
Refseq	XP_020193215.1	0.0	uncharacterized protein LOC109779044 isoform X1
Refseq	XP_020193216.1	0.0	uncharacterized protein LOC109779044 isoform X1
TrEMBL	M8BLL9	0.0	M8BLL9_AEGTA; Uncharacterized protein
STRING	EMT07674	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5494	25	26

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04450.2	3e-19	G2-like family protein