PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT06884
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 181aa    MW: 20385.9 Da    PI: 5.8196
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT06884genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.72.8e-101061451054
               HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
               +rRR++iN+++  L+ l+P+      +K++ +++Le+Av+Y+k L
  EMT06884 106 KRRRHKINERLRVLQHLIPNG-----TKVDISTMLEEAVQYVKFL 145
               9******************97.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.60296145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-1398160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-12101156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-9102151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.04E-10105150No hitNo description
PfamPF000101.6E-7106145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MEAAECSSIW GSLDAICEES EMIAHLQSVL WCSSDSDANL CSSETDSTNA SFDLQVNDFG  60
SANERNISIK RKMQDHHNEV PVALSAARKS GYKSRAAMDS QSNYAKRRRH KINERLRVLQ  120
HLIPNGTKVD ISTMLEEAVQ YVKFLHLQIK LLSSDEMWMY TPLAYDGVNI SLPHLDSLAH  180
E
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020163881.11e-133transcription factor bHLH54-like
TrEMBLM8AZU71e-132M8AZU7_AEGTA; Transcription factor bHLH84
STRINGEMT068841e-133(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP145082123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-40bHLH family protein