PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT05769 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | ERF | ||||||||
Protein Properties | Length: 284aa MW: 32686.3 Da PI: 10.0248 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.2 | 7.2e-12 | 109 | 154 | 7 | 55 |
AP2 7 rwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++ +g+W+A+I + g +k+ +lg++ t eeAa a++ a + +g EMT05769 109 CRHHHNGKWEARIGRvF---G-NKYLYLGTYATQEEAAMAYDLAVIEHRG 154 57889*******99966...3.6*********************998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 1.2E-21 | 103 | 168 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.04E-20 | 103 | 164 | No hit | No description |
PROSITE profile | PS51032 | 15.988 | 103 | 162 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 7.2E-15 | 104 | 163 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.1E-7 | 110 | 150 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.19E-15 | 110 | 164 | IPR016177 | DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence Send to blast |
MEEQSREEYI GSLRRYTNNS NFWQVVLPVI RSDGVAKCDD TKDLSSSYGF APRLFTQEKH 60 WFLKRGVQVQ RRRKAGLILQ DLYILHIFQS LARKTLRVCM SVKFRDVFCR HHHNGKWEAR 120 IGRVFGNKYL YLGTYATQEE AAMAYDLAVI EHRGLNAVTN FDVSRYIKWH HHRHNHANDT 180 DQLPVRTSQP PTIDLNVTAL RDNDRLQQPQ ADRAQSAHSR PTGGPSVCCW PIGLSATRFK 240 PSRPAVGRQG PVGLQYTDRP VVGRLCSVGL LWADWCMPIF NNIL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | M8AWI8 | 0.0 | M8AWI8_AEGTA; AP2-like ethylene-responsive transcription factor | ||||
STRING | EMT05769 | 0.0 | (Aegilops tauschii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79700.2 | 3e-28 | AP2 family protein |