PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT01685
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family B3
Protein Properties Length: 1269aa    MW: 142197 Da    PI: 8.9883
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT01685genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.12.3e-111622272798
               ---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3  27 ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                g+   + +++le ++g++++v++  +k  ++ v+++GW eF++  +L +g +++F+ +g+s+f   v++f+
  EMT01685 162 RGQ--IPDKVKLEVPDGKTYNVQV--SKEENGLVFQSGWAEFARTYELVQGTILLFESSGSSCF--EVRMFN 227
               444..4568***************..*******************************8888999..777665 PP
2B357.52.5e-182603411098
               HHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3  10 vlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
               + +++ l++p kfa ++  g    s +++le ++g++++v++  ++ +++ vl +GW  Fv+a +LkegD+++F ++g+s+f  +v++f+
  EMT01685 260 A-SNNGLTIPEKFA-NYvRGH--ISEEIKLEVPDGQTYSVQV--DNEQNELVLLSGWDTFVSAYELKEGDTLLFGYNGNSQF--KVRIFN 341
               4.4566********.554444..5679***************..**********************************9999..999886 PP
3B355.97.6e-18410499299
               EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
        B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
               fkv    +++k   +++p kfa+++ g    s +++le ++g+ ++v++     + + vl++GW +F+ a +LkegD +vF+++g+s f  +vk+f+ 
  EMT01685 410 FKVV-ILSNFKD-EMTIPPKFATNFRGR--ISDEVKLEVPDGKIYNVQV--AEEQHKLVLRSGWANFAGAYELKEGDLLVFTYSGDSHF--KVKIFKP 499
               5555.3444554.59*******888766..6779***************..999999****************************9999..9999975 PP
4B345.91e-14596687494
               E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE...EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
        B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliy.rkksgr..yvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
               + +++ +l+ g lv+ k++a +h   ++++++++l + +++++W+ +l + + + ++  ++lt+GW +Fv++n+L+egD++ F+++++ s+   ++
  EMT01685 596 TAMNEKTLSDGYLVICKDYAVKHL--PHQDQMIKLCHpQNSKTWDANLAViSDGTCTlsCILTAGWLGFVRDNNLREGDICAFEVSKNdSRV--MI 687
               567899999**************5..346779999994556*******66633333457*************************98763433..44 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd100171.16E-11141227No hitNo description
SMARTSM010195.1E-4143229IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.4E-14144231IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.41E-14149231IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508639.756153229IPR003340B3 DNA binding domain
PfamPF023622.5E-9153227IPR003340B3 DNA binding domain
SuperFamilySSF1019362.75E-19249344IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.253250343IPR003340B3 DNA binding domain
CDDcd100176.89E-18250341No hitNo description
Gene3DG3DSA:2.40.330.102.2E-19251343IPR015300DNA-binding pseudobarrel domain
SMARTSM010191.4E-11252343IPR003340B3 DNA binding domain
PfamPF023621.2E-15254341IPR003340B3 DNA binding domain
SuperFamilySSF1019364.32E-23402502IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.104.0E-23403502IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.253407500IPR003340B3 DNA binding domain
CDDcd100172.53E-21407498No hitNo description
SMARTSM010195.8E-15409500IPR003340B3 DNA binding domain
PfamPF023622.6E-15409498IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.4E-16587689IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.9E-17587688IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086312.52593693IPR003340B3 DNA binding domain
SMARTSM010191.4E-6594693IPR003340B3 DNA binding domain
PfamPF023626.6E-12596687IPR003340B3 DNA binding domain
CDDcd100172.48E-12602691No hitNo description
SuperFamilySSF562199.81E-149181076IPR005135Endonuclease/exonuclease/phosphatase
Gene3DG3DSA:3.60.10.101.6E-59471076IPR005135Endonuclease/exonuclease/phosphatase
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1269 aa     Download sequence    Send to blast
MGFAVPGGGD GADPGAPSAS TPPATRSSAR NRTRRDGVGG GGVSLRRNTV VRCRFWEGMR  60
TRKKKKKKKK VIWVFARGLG VGISNSYFQF VTCCHTMKTS FTSCNECVVF ARCCHTMKTS  120
FTSCNECVVY HNWHRMGDWK KCFVKIVGEF VDVPINLANY IRGQIPDKVK LEVPDGKTYN  180
VQVSKEENGL VFQSGWAEFA RTYELVQGTI LLFESSGSSC FEVRMFNQTG CEKELSCVPM  240
NNTPCVNKMR FFMVMMGIGA SNNGLTIPEK FANYVRGHIS EEIKLEVPDG QTYSVQVDNE  300
QNELVLLSGW DTFVSAYELK EGDTLLFGYN GNSQFKVRIF NVNGFDKLLS CVVKNITPCV  360
QKRSAYHDNP LQSPRERTGP NDHRNKACTI CIECVGRHYW HMEDHNWSFF KVVILSNFKD  420
EMTIPPKFAT NFRGRISDEV KLEVPDGKIY NVQVAEEQHK LVLRSGWANF AGAYELKEGD  480
LLVFTYSGDS HFKVKIFKPS GCENEFSCVT MSCGSNVQER DICHDQSLPT KKRCRNDAED  540
VTSSKDIQEP RGSGVLQGSS ESRYILEMSC KLTSAQRARV DTFVKESQTG IEFYVTAMNE  600
KTLSDGYLVI CKDYAVKHLP HQDQMIKLCH PQNSKTWDAN LAVISDGTCT LSCILTAGWL  660
GFVRDNNLRE GDICAFEVSK NDSRVMITVH PLKESGHPEY VITGHTKPAS QQKKKWTHPG  720
YVVARSIKLT RKQKRKIEER IQAIRPEIKI FVSVLQRSSY SLGYADCHLP REDQIMRLRL  780
PGKNDTWKAK LYVGDKVNGK FNALRRGWKK LSVIVIALCM IFFRDIEVST AERALEMIRN  840
VAVVKPMNDS DIDALGVRVF DSFCADLAPS LPETEEDDCS ISPRDSILAD SQVVRSTELG  900
CEDRVEDQNK PKRKWKRRSG GILLGVKCDT LEVRNVVMGD FTVKFRVRSK ADGFNWALVV  960
VYGAAQPELK PAFLADLVRI CGSGQLPILV GGDFNIIQRQ EEKNNDNFDG RWSFMFNTII  1020
ESLDLREIEL SGRKFTWANT LPTPTFEKLD RVLSSVEWEQ KFPLVTVQEL SHAISDCRCT  1080
KVGTFLYPFT CARAVVAAPA AGLGGAEEGK IQGCRGSAQA RSMKSEGTRP ASLDENQKTK  1140
TPGKILRGRP KTPGKTLAGD AHKIPARPLP GASARPRLGP HLPEVRCPAP ALMWRPAHQL  1200
GEHLRGSMQL LGQLAKHLRG GMQIFVKTLP PHQLSSQLAN VVLHASSAWM RVRTRRGGDG  1260
RDELPCCPR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16169RKKKKKKKK
26369KKKKKKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020161804.10.0B3 domain-containing protein LOC_Os12g40080-like isoform X1
RefseqXP_020161805.10.0B3 domain-containing protein LOC_Os12g40080-like isoform X1
TrEMBLR7W0540.0R7W054_AEGTA; B3 domain-containing protein
STRINGEMT016850.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP56234179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-22B3 family protein