PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT00743 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | WRKY | ||||||||
Protein Properties | Length: 298aa MW: 31405.8 Da PI: 5.4179 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.3 | 2e-30 | 74 | 132 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs+fpr+YYrC+s+ gCp++k+vers+ dp++v itY+ eHnh+ EMT00743 74 TDSWAWRKYGQKPIKGSPFPRAYYRCSSSkGCPARKQVERSQADPDTVLITYSYEHNHS 132 69*************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 30.171 | 68 | 134 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 9.5E-30 | 70 | 132 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.22E-25 | 71 | 132 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.5E-36 | 73 | 133 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.0E-25 | 75 | 131 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence Send to blast |
MDGEWSDGAV SGGEQKASGD GVSADCNSPG SPSPPAVPST SGRRRSLQKR VVTVPLADLN 60 VPRPKGVGEG NTPTDSWAWR KYGQKPIKGS PFPRAYYRCS SSKGCPARKQ VERSQADPDT 120 VLITYSYEHN HSSTVARAQN RQTQSPRKPN KERPLPSPEP AKSDGTHHGT ANVAGGLVTA 180 SPAPAIEVHD DFRWLYDVVS VTSSTSPSEV EAADDMLLYG PMFFGKAVVE VDTAALLPDE 240 FGGEAIGGGG GEEEDAMFAG LGELPECAIV FRRHARDGLA AMAGGVKVEQ PAEGTAMT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 4e-18 | 49 | 131 | 6 | 76 | Disease resistance protein RRS1 |
5w3x_D | 4e-18 | 49 | 131 | 6 | 76 | Disease resistance protein RRS1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00167 | DAP | Transfer from AT1G29280 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK356823 | 0.0 | AK356823.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv1040G05. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020149507.1 | 0.0 | probable WRKY transcription factor 65 | ||||
TrEMBL | A0A3B6GVW9 | 0.0 | A0A3B6GVW9_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A453FGK4 | 0.0 | A0A453FGK4_AEGTS; Uncharacterized protein | ||||
TrEMBL | N1QPY3 | 0.0 | N1QPY3_AEGTA; Putative WRKY transcription factor 65 | ||||
STRING | EMT00743 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP10947 | 33 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29280.1 | 2e-42 | WRKY DNA-binding protein 65 |