PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011399624.1

Organism

Auxenochlorella protothecoides

Taxonomic ID

3075

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella

Family

bZIP

Protein Properties

Length: 490aa MW: 50866.3 Da PI: 4.7086

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011399624.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.4	1.3e-12	160	219	1	60
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 e e kr++r+++NRe A sRqRKka++e Le+ + +L+++ +aL + +l+ e + l+ XP_011399624.1 160 EDEAKRAIRMARNRENAHLSRQRKKAQLEGLEQTCSALTGQVRALSTFVGQLTAENELLR 219 6789*******************************************9999999988665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.2E-13	158	223	No hit	No description
SMART	SM00338	3.4E-11	160	224	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	6.9E-11	160	220	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.082	162	225	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.25E-9	164	222	No hit	No description
CDD	cd14704	1.21E-13	165	215	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence Send to blast
MSTLVQPLFE PEDVWPGVLM DDDVLESFQA SRLHLVVLED VRASPSASAV QFPLTHQALD 60 DLDQFEINRP PSPGQVLELL SDGVGTSPWG LDAGAVADPG KPDEAFGELI PMARPIHTPT 120 RSADGSAHHQ TSSGEDASNT SRYQQSSPAS QQDGAAGADE DEAKRAIRMA RNRENAHLSR 180 QRKKAQLEGL EQTCSALTGQ VRALSTFVGQ LTAENELLRR HLAAACTAAG RPLPDLPRGA 240 ARLAQNSGAG AGALRHAGRA LQMMPGRALQ MMPGRAAAAA EAGPGPELMG ALADLAPLAL 300 SLEGGGLGPL DPQSALPSLA EPVFKAWGMP PPGICRKLHS IEAGSLPLPL DVSRGDLVEF 360 LEGRLGAQGR ALSAVAPPLP RPLALLPGEG PEAPRDYPGA AESVGADPSQ CPPSPTRDVE 420 EESENVVRHD WMSVAEPVLL TALSAPAANA SNGAGAAAAP GVVVVMLEPG RRLVTYACDD 480 AVPRVAARAA

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence Send to blast

MSTLVQPLFE PEDVWPGVLM DDDVLESFQA SRLHLVVLED VRASPSASAV QFPLTHQALD  60
DLDQFEINRP PSPGQVLELL SDGVGTSPWG LDAGAVADPG KPDEAFGELI PMARPIHTPT  120
RSADGSAHHQ TSSGEDASNT SRYQQSSPAS QQDGAAGADE DEAKRAIRMA RNRENAHLSR  180
QRKKAQLEGL EQTCSALTGQ VRALSTFVGQ LTAENELLRR HLAAACTAAG RPLPDLPRGA  240
ARLAQNSGAG AGALRHAGRA LQMMPGRALQ MMPGRAAAAA EAGPGPELMG ALADLAPLAL  300
SLEGGGLGPL DPQSALPSLA EPVFKAWGMP PPGICRKLHS IEAGSLPLPL DVSRGDLVEF  360
LEGRLGAQGR ALSAVAPPLP RPLALLPGEG PEAPRDYPGA AESVGADPSQ CPPSPTRDVE  420
EESENVVRHD WMSVAEPVLL TALSAPAANA SNGAGAAAAP GVVVVMLEPG RRLVTYACDD  480
AVPRVAARAA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011399624.1	0.0	TGACG-sequence-specific DNA-binding protein TGA-1B
TrEMBL	A0A087SLT2	0.0	A0A087SLT2_AUXPR; TGACG-sequence-specific DNA-binding protein TGA-1B
STRING	A0A087SLT2	0.0	(Auxenochlorella protothecoides)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP5392	8	8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56660.1	3e-10	basic region/leucine zipper motif protein 49

Link Out ? help Back to Top
Entrez Gene	23618034