PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 895235 | ||||||||
Common Name | ARALYDRAFT_895235 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | EIL | ||||||||
Protein Properties | Length: 565aa MW: 63627 Da PI: 5.2569 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 433.6 | 1.9e-132 | 38 | 401 | 1 | 351 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdr 103 e+l++rmwkd+++lkr+ker+k + a +++ +k+++qa+rkkmsraQDgiLkYMlk mevc+++GfvYgiipekgkpv+g+sd++raWWkekv+fd+ 895235 38 EDLERRMWKDRVRLKRIKERQKVGS--QGA-QTKETPKKISDQAQRKKMSRAQDGILKYMLKLMEVCKVRGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDK 137 89*****************999754..444.5677899***************************************************************** PP XXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHH CS EIN3 104 ngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawk 206 ngpaai+ky+ ++l++++++++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekg++pPWWPtG+e+ww +lgl+k+q+ ppy+kphdlkk+wk 895235 138 NGPAAIAKYEEECLAFGKSDGN----RNSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQS-PPYRKPHDLKKMWK 235 ****************987777....77999*********************************************************.9************* PP HHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX........XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXX CS EIN3 207 vsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss........slrkqspkvtlsceqkedvegkkeskikhvqavk 299 v+vLtavi+hm p+i++i++++rqsk+lqdkm+akes+++l+vlnqee+++++ s++ +s + +++k ++++++++dv+g+++ + + +++++ 895235 236 VGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQPSSDngNSnvteahrrGNNADRRKPVINSDSDYDVDGTEDASGSVSSKDS 338 *********************************************************652267876544333378889999999*****66666666666666 PP XXX..................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXX CS EIN3 300 tta..................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisq 351 +++ +++ +r+rk+++ +s + + q+++ ++ e+++i++d+n+++ 895235 339 RRNqtqkeqptaishivrdqdKAEKHRRRKRPRIRS-------GTNNRQEEEQPEAEQRNILPDMNHVDA 401 655667777777876665433333333333222222.......235567777888999*******99875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 3.2E-126 | 38 | 283 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 7.5E-71 | 159 | 291 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 3.27E-60 | 164 | 286 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0042762 | Biological Process | regulation of sulfur metabolic process | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 565 aa Download sequence Send to blast |
MGDLAVSVAD IRMENEPDDL ASDNVAEIDV SDEEIDAEDL ERRMWKDRVR LKRIKERQKV 60 GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV CKVRGFVYGI IPEKGKPVSG 120 SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS 180 LMQHCDPPQR KYPLEKGTPP PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT 240 AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE 300 AHRRGNNADR RKPVINSDSD YDVDGTEDAS GSVSSKDSRR NQTQKEQPTA ISHIVRDQDK 360 AEKHRRRKRP RIRSGTNNRQ EEEQPEAEQR NILPDMNHVD APLLEYNIDG TNHEEDVVDP 420 NIALGPEENG LELVVPEFHN NYTYLPPGNG QDMMPVDERP MLYGPNPNHE LQFGSGYNFY 480 NPSAVFVHNQ EDDILHTQIG MNAQAPPHNS GFEAPGGVLQ PLGLLGNEDG VAGSELSQYP 540 SDIMSPFNDL SFDYGIDDFS WFGA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 3e-87 | 163 | 294 | 9 | 140 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00233 | DAP | Transfer from AT1G73730 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 895235 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AF004215 | 0.0 | AF004215.1 Arabidopsis thaliana ethylene-insensitive3-like3 (EIL3) mRNA, complete cds. | |||
GenBank | AY070044 | 0.0 | AY070044.1 Arabidopsis thaliana putative ethylene-insensitive protein EIL3 (At1g73730) mRNA, complete cds. | |||
GenBank | AY133839 | 0.0 | AY133839.1 Arabidopsis thaliana clone U18784 putative ethylene-insensitive protein EIL3 (At1g73730) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002888943.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 0.0 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | D7KRL6 | 0.0 | D7KRL6_ARALL; Uncharacterized protein | ||||
STRING | scaffold_202309.1 | 0.0 | (Arabidopsis lyrata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4658 | 25 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 0.0 | ETHYLENE-INSENSITIVE3-like 3 |
Link Out ? help Back to Top | |
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Phytozome | 895235 |
Entrez Gene | 9323566 |
Publications ? help Back to Top | |||
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