PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 484862
Common NameARALYDRAFT_484862
Organism
Arabidopsis lyrata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family bZIP
Protein Properties Length: 333aa    MW: 38040.6 Da    PI: 7.5966
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
484862genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1408.3e-13250301556
             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
             +r+rr++kNRe+A rsR+R++a++ eLe +  +L++eN++Lk+ +ee +k+ 
  484862 250 RRQRRMIKNRESAARSRARRQAYTVELELELNNLTEENTKLKEIVEENEKKR 301
             79****************************************9999988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.7E-8243311IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.772248300IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.25E-9250299No hitNo description
PfamPF001701.1E-11250302IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.1E-12250301No hitNo description
PROSITE patternPS000360253268IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0033613Molecular Functionactivating transcription factor binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MSVFESETST FHVYNNHEIQ TQPQMQTFLS EEEPVGRQNS ILSLTLDEIQ MKSGKSFGAM  60
NMDEFLANLW TTVEENDNNG RGGPHHDREK PAVLPRQGSL SLPVPLCKKT VDEVWLEIQN  120
GVQQHPPSSN SGQNSDEDIR RQQTLGEITL EDFLVKAGVV QEPLKTTMRM SSSDFGYNPE  180
FGVGLHCQNQ NNYGDNRSVY SDNRPFYSVL GESSSCMTGN GRSNQYLTGL DAFRIKKRII  240
DGPPEILMER RQRRMIKNRE SAARSRARRQ AYTVELELEL NNLTEENTKL KEIVEENEKK  300
RRQEIINRSK QVTKEKKGDK LRKIRRMASA GW*
Functional Description ? help Back to Top
Source Description
UniProtCould participate in abscisic acid-regulated gene expression during seed development. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap484862
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAJ4196000.0AJ419600.1 Arabidopsis thaliana mRNA for basic leucine zipper transcription factor (atbzip67 gene).
GenBankBT0029230.0BT002923.1 Arabidopsis thaliana clone RAFL15-01-K19 (R20103) putative bZIP protein (At3g44460) mRNA, complete cds.
GenBankBT0043420.0BT004342.1 Arabidopsis thaliana clone U20103 putative bZIP protein (At3g44460) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020882326.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 1
SwissprotQ8RYD60.0AI5L1_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 1
TrEMBLD7LNS00.0D7LNS0_ARALL; Uncharacterized protein
STRINGfgenesh2_kg.5__854__AT3G44460.10.0(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM116522230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.10.0bZIP family protein