PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.Z68X5

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 177aa MW: 20633.2 Da PI: 7.2191

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.Z68X5	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.3	5.1e-18	65	151	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fY +YA++vGF+ +++++ +k+ ++ +++ +C++ g+r++++ ++r+++++ ++Cka++ vk+++ kw ++k+el H+H + Araip.Z68X5 65 QFYYNYANKVGFEPHIRNTNFNKNRKTPINESIQCNRDGYRTKKNPV---TQRSNTVSSVHCKARIYVKLDTeLRKWILSKVELAHTHRC 151 6**************************************998766...8899999**********9899***********86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.3E-15	65	152	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence Send to blast
MQPSSEEIHS FDTHIDMDDI NICNSSSNSA TETECTTEVI IHPTISDEEI PKVGMLFGIL 60 EEARQFYYNY ANKVGFEPHI RNTNFNKNRK TPINESIQCN RDGYRTKKNP VTQRSNTVSS 120 VHCKARIYVK LDTELRKWIL SKVELAHTHR CDPSLSWMFK KNRELTMHVK DVIERND

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.Z68X5

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016200077.1	1e-131	protein FAR1-RELATED SEQUENCE 8-like
Refseq	XP_025653061.1	1e-131	protein FAR1-RELATED SEQUENCE 8-like
TrEMBL	A0A444Z1K7	1e-130	A0A444Z1K7_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	2e-11	FAR1 family protein