PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.XVA98
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 255aa    MW: 28379.1 Da    PI: 9.9805
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.XVA98genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY84.41.1e-26155212259
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dgy+W KYG K+ k+s+f rsYYrCt+ gC++kk+ver+ +dp+   +tYeg H+h+
  Araip.XVA98 155 EDGYKWCKYGEKSLKKSPFQRSYYRCTTIGCNAKKRVERCLNDPTHALTTYEGLHTHN 212
                  8********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-27142214IPR003657WRKY domain
SuperFamilySSF1182905.62E-25147214IPR003657WRKY domain
PROSITE profilePS5081125.935149214IPR003657WRKY domain
SMARTSM007744.4E-29154213IPR003657WRKY domain
PfamPF031061.6E-20155211IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
SLFGLTNVGD FGPSLYEWLG IAEEDASLVE RRVKHPLPSL PPDAVILESS GIVAHSQNPA  60
ISIIPTNNSD VVIANNSNTN NRVGLKRSAK SIVSGNVNLR GDELDDEKNN ITTRLKLRES  120
TMASIAATMN MNNKRNKNNL SKFAFLTKSE SKNLEDGYKW CKYGEKSLKK SPFQRSYYRC  180
TTIGCNAKKR VERCLNDPTH ALTTYEGLHT HNLPPILPPP SRSFGLYNNS TLSSILGRGR  240
VAPQYHHHRY QPTSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-211472141077Probable WRKY transcription factor 4
2lex_A6e-211472141077Probable WRKY transcription factor 4
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.XVA98
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016195834.11e-176probable WRKY transcription factor 12
TrEMBLA0A444ZKB71e-175A0A444ZKB7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3032522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.15e-32WRKY DNA-binding protein 23