PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.XB73L
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family AP2
Protein Properties Length: 368aa    MW: 38886.9 Da    PI: 6.4181
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.XB73LgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.93.2e-10131178155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  s y+GV++++++gr++A+++d      +   + g     eeAa+a++ a+ k++g
  Araip.XB73L 131 SIYRGVTRHRWTGRYEAHLWD------NSCRREGQSTQ-EEAAEAYDIAAIKFRG 178
                  57*******************......55666677777.*************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.4E-4131178IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-12131188IPR016177DNA-binding domain
CDDcd000186.08E-19131188No hitNo description
PROSITE profilePS5103214.289132186IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-9132187IPR001471AP2/ERF domain
SMARTSM003801.0E-22132192IPR001471AP2/ERF domain
PRINTSPR003671.2E-6133144IPR001471AP2/ERF domain
PRINTSPR003671.2E-6168188IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MDSSSSFSLS NHSSSSPLSL FHPSFTDAAD VRSTNLSIFT GVPKFEDFLG ASAATAPTAT  60
APCAPPPPPP PPPQLARFST DNNGVVYDSE LKTTITACFP GGFGGGAATG AELSQRPSPK  120
KTVDTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQS TQEEAAEAYD IAAIKFRGLN  180
AVTNFDMSRY DVKSIASSTL PIGGLSNKNK NSADDPVVSQ PPPPPPPPSS STLSFAIPIK  240
QDPSADYWSI IGYSNNTQLE SARGTTVIAP AATSFPRPNN NGNGMMDFSA APSADGFLNG  300
GGIFVHHHQQ ESGGGSSPSS GGSSIPLATP IFTLNSNNNY ENWIGPTLHT FQAHAKPSLF  360
QTPIFGME
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.XB73L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016201259.11e-129AP2-like ethylene-responsive transcription factor AIL5
RefseqXP_025630760.11e-129AP2-like ethylene-responsive transcription factor AIL5
TrEMBLA0A445AV391e-127A0A445AV39_ARAHY; Uncharacterized protein
STRINGXP_007154750.11e-74(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3019622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.13e-30AINTEGUMENTA-like 5