PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.WHJ14
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 290aa    MW: 32379.4 Da    PI: 7.6136
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.WHJ14genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.11e-29129186258
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                   Dgy+WrKYGqK+ ++++ pr+Y+rC++a +Cpvkkkv+rs edp++++ tYegeHnh
  Araip.WHJ14 129 MDGYQWRKYGQKVTRDNPSPRAYFRCSFApSCPVKKKVQRSVEDPTILVATYEGEHNH 186
                  6***************************99**************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.1E-28124187IPR003657WRKY domain
SuperFamilySSF1182909.02E-25127188IPR003657WRKY domain
SMARTSM007741.1E-33128188IPR003657WRKY domain
PfamPF031064.4E-24130186IPR003657WRKY domain
PROSITE profilePS5081125.304130189IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MDSTCVDTSL NLNLSPSPTH MNPTVEVVLV EELHRLSCEN KRLTETLTHM CVSYEALQKH  60
LTKLMNTSSD CYNHHQSRKR KAESYENCND EEESLLLIKR PNNIVHNNNN KVSKVLVKTD  120
ASDSSLYVMD GYQWRKYGQK VTRDNPSPRA YFRCSFAPSC PVKKKVQRSV EDPTILVATY  180
EGEHNHGRSQ TEISLVSSQS HSSETIIPLV SSPSSRITSS PTTLDLVKNS ISSVDIDHNA  240
QKKSSSISSS IHKFLVQEMA TSLTSDPNFT AVLATAISGK ILEHTSLEKL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-191281861471WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.WHJ14
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150364e-33AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016207835.10.0probable WRKY transcription factor 40 isoform X1
RefseqXP_025659864.10.0probable WRKY transcription factor 40
TrEMBLA0A445CWK20.0A0A445CWK2_ARAHY; Uncharacterized protein
STRINGXP_007161095.11e-104(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97334115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.15e-57WRKY DNA-binding protein 40