PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Araip.UMW8F | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 296aa MW: 33981.4 Da PI: 6.5139 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 83.3 | 2.3e-26 | 100 | 150 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +k +s +++s+yF++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl Araip.UMW8F 100 TKMLSRKMISEYFYMPITQAAKELDVGLTLLKKRCRELGIRRWPHRKLMSL 150 7889********************************************997 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 17.541 | 86 | 170 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 8.2E-21 | 103 | 150 | IPR003035 | RWP-RK domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0051302 | Biological Process | regulation of cell division |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 296 aa Download sequence Send to blast |
GNTNEYPPLG CWAHELECYP SLPFYETLSI EPISTIKDCD FYDIKKGFSV WNEVDVGFDC 60 SEKISSSSSS LSNNNNEENK SIRRVMNKRV CREERSSNST KMLSRKMISE YFYMPITQAA 120 KELDVGLTLL KKRCRELGIR RWPHRKLMSL QTLITNVQEL GKEEGRESEE KLRNAIEILE 180 KEKKLLEEMP DMQLEDNTKR LRQACFKANY KKRKLMMGCT SSNSSVESSS SSSYHIIGHN 240 ALRTASQSNT MGGVEFISFD DDEDQERDIK SVLSLPSLSH NIQMCSSYMF NHPSGE |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Araip.UMW8F |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020979105.1 | 0.0 | protein RKD3-like | ||||
Refseq | XP_025628540.1 | 0.0 | protein RKD3-like | ||||
TrEMBL | A0A445AZT2 | 0.0 | A0A445AZT2_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA05G01030.2 | 1e-90 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6184 | 30 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G18790.1 | 3e-42 | RWP-RK domain-containing protein |